KEGG   Caenorhabditis briggsae (nematode): CBG_21225
Entry
CBG_21225         CDS       T01054                                 
Symbol
Cbr-lis-1
Name
(RefSeq) Protein CBR-LIS-1
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr00565  Ether lipid metabolism
cbr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    CBG_21225 (Cbr-lis-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_21225 (Cbr-lis-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbr04147]
    CBG_21225 (Cbr-lis-1)
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CBG_21225 (Cbr-lis-1)
Exosome [BR:cbr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CBG_21225 (Cbr-lis-1)
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 Nup160 LisH WDR54 PROPPIN EAD1 LisH_2 DUF6813
Other DBs
NCBI-GeneID: 8584821
NCBI-ProteinID: XP_045097220
Position
III:complement(12908660..12915132)
AA seq 390 aa
MSLSERQREEINRAVAEYLQNNGYSEAFNMLLKEASLSENDIKPLGGILEKKWTTVLRLQ
RKVNDLEAKLLESQQEINHGAPTRDKRQAADWIPRPPETQKLIGHRLPVTRVIFHPLWTI
MASCSEDATIKVWDYETGQLEKTLKGHTDAVNDIAIDAAGKQLVSCSTDLTIKLWDFGQS
YDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVFTFRGHNDWVRMIR
ISHDGTLFASGSLDQTVSVWSLPRKQRNWYFEIMSMRWSVSKPEGNSTHILFSGSRDRSI
KAWNISTGEVIFTLSAHENWVRGLAFHPKGKYLVSVADDKMMRIWELSAQRCMKAIEAHE
HFVSTVAFHQTNPYVITGSVDMSCKVWECR
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgagtttgtcagagaggcaacgagaggaaattaatcgagcagtggccgaatatctgcag
aacaatggatactccgaggcgttcaacatgcttctcaaggaggcgagcttgagcgaaaac
gatatcaaaccactgggcggcattctggagaagaagtggactacggtacttcgacttcaa
cgcaaagtcaacgatttggaggcgaaactgctcgaatcacaacaggaaatcaatcatggc
gcgccgacgagagacaaacgacaggcggccgactggattccccgtccaccggagacgcag
aagctcatcggacatcgtcttccggtcacccgcgtcatttttcatccgttatggaccatt
atggccagctgctcagaggacgccactattaaggtatgggactacgaaacgggacaactg
gagaagacactcaagggacacacggatgccgtcaacgatattgctatcgatgcggctgga
aagcaattggtatcctgctcgacggacctgacaatcaaactgtgggactttggtcagtcg
tacgattgtctgaaatcgctgaaaggacacgagcatactgtatcgtcggtcaccttcctg
ccaacgggcgattttgtgctctccgccagccgggatcatacgattaagcagtgggatatc
tccaccggctactgtgtgttcacattccgcggccacaacgattgggtccgaatgattcgt
atctcgcacgacggaacgctcttcgcatcgggaagtctggatcaaacggtttccgtatgg
tctttgccacgaaagcagcgaaattggtacttcgagatcatgagcatgcggtggagtgtg
tcgaaacccgaaggcaattccacacacattctgttcagtggcagtcgtgacagaagcatc
aaagcgtggaatatcagcactggcgaagtgattttcaccctatcggctcacgagaattgg
gttcgcggattggcgttccatccgaagggaaagtatttggtatcagtggccgatgataag
atgatgcgaatctgggagttgagtgctcaacggtgtatgaaggccatcgaggcacacgag
cacttcgtttcaacagttgcattccaccaaacgaatccatacgtgatcactggaagtgtc
gacatgtcatgcaaagtttgggagtgccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (26)   

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