KEGG   Caenorhabditis briggsae (nematode): CBG_21781
Entry
CBG_21781         CDS       T01054                                 
Symbol
Cbr-rpb-12
Name
(RefSeq) Protein CBR-RPB-12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03020  RNA polymerase
cbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CBG_21781 (Cbr-rpb-12)
  09124 Replication and repair
   03420 Nucleotide excision repair
    CBG_21781 (Cbr-rpb-12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbr03021]
    CBG_21781 (Cbr-rpb-12)
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_21781 (Cbr-rpb-12)
Transcription machinery [BR:cbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CBG_21781 (Cbr-rpb-12)
  RNA polymerase III system
   RNA polymerase III
     CBG_21781 (Cbr-rpb-12)
  RNA polymerase I system
   RNA polymerase I
     CBG_21781 (Cbr-rpb-12)
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CBG_21781 (Cbr-rpb-12)
SSDB
Motif
Pfam: DNA_RNApol_7kD A2L_zn_ribbon Cytochrome_C7 HypA DZR_2 DUF5816 zinc_ribbon_13
Other DBs
NCBI-GeneID: 8575009
NCBI-ProteinID: XP_002633012
UniProt: A8Y0I0
Position
IV:complement(4330516..4330959)
AA seq 62 aa
MDGSATPGPGQAHVKSNSMIYICGECHGENEIKPKDAIRCRECGYRILYKKRCRKLMVYD
AR
NT seq 189 nt   +upstreamnt  +downstreamnt
atggacggcagcgctactccaggtccagggcaagctcatgtcaagtcgaacagtatgatc
tacatttgtggagaatgccacggtgagaacgagatcaagccaaaggacgcgattcgctgc
cgagagtgcggctatcgtattctctacaagaagcgctgcagaaagttgatggtctacgac
gctcgctaa

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