KEGG   Citrobacter braakii: A6J81_21955
Entry
A6J81_21955       CDS       T04825                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
cbra  Citrobacter braakii
Pathway
cbra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    A6J81_21955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbra03400]
    A6J81_21955
Enzymes [BR:cbra01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     A6J81_21955
DNA repair and recombination proteins [BR:cbra03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A6J81_21955
SSDB
Motif
Pfam: RecD_N AAA_19 AAA_30 Helicase_RecD UvrD_C_2 Viral_helicase1 SH3_13 AAA_11 AAA_22 UvrD-helicase SLFN-g3_helicase AAA_16 nSTAND3 T2SSE MukB AAA_28 FtsK_SpoIIIE UvrD_C CbiA DUF6079 DEAD DO-GTPase1 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ARC43161
Position
4514795..4516624
AA seq 609 aa
MTIQKRLLEAVEQKQLRPLDAQFALAVAGNDNPAVALAAALLSREAGEGHVCLPLSRLSL
SEDAHPLLSGWLAEAGEPENWADCLLASGAVSRGDQPTPLVLYGDRLYLNRMWHNERAVA
RFFSEVNHAIEVDEQRLTHTLEALFPLSEGVNWQKVAAAVALTRRISVISGGPGTGKTTT
VARLLAALIQMADGERCRIRLAAPTGKAAARLTSSLGAALRELPLTDEQKKRIPDDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDRDQ
LASVEAGAVLGDICAFVSDGFTPERARQLSRLTGSAIPAGPGTQAAALRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKAAIKTVFQQGFSDIEKRTLHSSEDYAAMLDEALAGYGHYLD
LLREGAEPDAVIQAFNEYQLLCALREGPFGVGGLNERIEQVMAQKRKIHRSPHSRWYEGR
PVMIARNDSSLGLFNGDIGIALDRGQGLRVWFTLPDGAIKSVQPSRLPEHETTWAMTVHK
SQGSEFDHAALILPSQHSPVVTRELVYTAVTRARRRLSLYADERILSGAVATRTERRSGL
SSLFNDGMM
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgacaatccagaaacgattactggaagccgttgagcaaaagcagctcaggcctctggat
gctcagtttgcgctggcggttgccggaaatgataaccctgccgttgcgctggctgcggcg
ttgctcagccgcgaagcaggtgaaggacacgtctgcttaccgctttcacggttatccctg
agtgaggacgcgcatcctctgttaagcggctggctcgctgaagcgggagagcctgagaac
tgggcggactgcctgctggcttccggggcggtaagccgtggcgatcaacccacgccgctg
gtgctgtatggcgatcgcctgtacctgaaccggatgtggcataacgaacgcgcggtggcg
cgctttttcagtgaggtaaaccacgccattgaggtggacgaacaacgcctgacccatacg
ctggaggcgctgtttccgctatcagagggagttaactggcaaaaagtggccgctgctgta
gcgctgacccgtcgtatatcggtgatctccggcgggccgggaaccggaaaaacgacaacg
gttgcgaggctgctggcggcattgattcagatggcggacggtgaacgctgtcgtattcga
ctggcagcgccaacgggaaaggcggcagcgcgcctgacctcctcgctgggtgcggcactg
cgagagctaccgctaaccgatgagcaaaagaaacgcattcccgatgacgccagtacgctg
catcgattattaggcgctcagcctggcagtcagcgcctgcgtcatcatgcgggaaacccg
ctgcatctggatgtgctggtggtggatgaagcttcgatgatcgatttgccgatgatgtcg
cgccttatcgatgcgctgccgccgcacgggcgggtgatttttctgggcgatcgcgaccag
ctcgcttctgtcgaggcgggggcggtgctgggggatatctgtgctttcgtcagtgacggg
tttaccccggaacgcgcccgccagctcagtcgcctgaccggaagcgctattccggcaggg
ccgggaactcaggcggcagctctgcgcgacagtctgtgcctgctgcaaaagagctaccgt
tttggcagcgattccggaattggtcagttggctgctgcgattaatcgcggcgacaaagct
gcgataaaaacggttttccagcagggatttagcgacatcgaaaaacgcacgttacacagc
agcgaggattatgccgcaatgctggatgaggcgttggcgggctatgggcactatctggat
ttactgcgcgagggtgccgagccggatgctgtcattcaggccttcaatgagtatcaactg
ctatgtgccctgcgggaagggccgtttggcgtgggcggtttgaatgaacgcatcgagcag
gtgatggcgcaaaaacgtaaaattcatcgttcaccgcatagccgctggtatgagggaagg
ccggtgatgatcgcgcgcaatgacagttcgctgggattatttaacggcgatatcggtatt
gccctcgatcgtggacagggcctgagggtgtggtttacgctgccggacggtgctatcaaa
tcggtgcaacccagccgcttgccagagcatgaaaccacctgggcgatgacggtgcataaa
tcgcagggatccgagtttgaccacgcggcgttgattttacccagccagcattcacccgtg
gttacccgcgagctggtctataccgccgttacccgcgcgcgtcgccgtctgtcgctgtat
gccgatgagcggatactgagtggcgccgttgccacccgcaccgaacgtcgcagcggattg
tcgtcattatttaatgacggcatgatgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (32)   

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