KEGG   Clostridium butyricum: ATN24_12225
Entry
ATN24_12225       CDS       T04197                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
cbut  Clostridium butyricum
Pathway
cbut00300  Lysine biosynthesis
cbut00550  Peptidoglycan biosynthesis
cbut01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cbut00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    ATN24_12225
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    ATN24_12225
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cbut01011]
    ATN24_12225
Enzymes [BR:cbut01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     ATN24_12225
Peptidoglycan biosynthesis and degradation proteins [BR:cbut01011]
 Precursor biosynthesis
  Amino acid ligase
   ATN24_12225
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase DUF1611
Other DBs
NCBI-ProteinID: ALP90871
UniProt: A0A3R9F9S4
Position
1:complement(2702924..2704384)
AA seq 486 aa
MNLKSILNGLDYELLQGTEDVQINKINYDSRKVCKDDLFVCVKGYATDGHKYAEKAVLNG
AKVIVIQDDVDIEDTGITIVKCSDTRKALALMGANYYGNPSEKMKIIGITGTNGKTTTAF
MIKDILECAGKKVGLIGTIANYICGEKIHTERTTPESLELQELFGEMVEKGVEYCVMEVS
SHSLALDRVYGVKFECGIFTNLTRDHLDFHKTFENYYDAKFKLFERSCIKVINVDDNYGI
QVLKDCQKLNAENIYSFSVKSDSDYKAYDELMGSRDIKFKVVLDEEEEFILGIPGEYNIY
NALGAIGVCHKMGIAIEAIKEGIENALVPGRCERVGKEYNLPYEIIIDYAHTPDGLENIL
KTAKAFTKGKLIAIFGCGGDRDKVKRPQMGKIGIDIADLAVITSDNPRSEDPMAIIEDIK
AGLDKDNYIIIENRHDAIKKAIELAEKDDVIVIAGKGHETYQILKDKTIHFDEREVVKEI
LDNIKR
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgaacctaaagagtattttaaacggactggattatgaacttttacaaggaacagaggac
gtacagataaacaaaataaattatgatagcagaaaagtgtgcaaagatgatttatttgta
tgtgtaaagggatatgcaacggatggacataaatatgctgagaaggctgttttaaatgga
gctaaggttattgttatacaagatgatgtagatatagaggatacaggaataacaatagtt
aaatgttcagatacaagaaaagcattagcacttatgggcgcaaattattatggtaatcct
tctgaaaagatgaaaattatcggaataacaggaactaatggaaagactacaactgcattt
atgataaaagatatattagaatgtgcaggcaaaaaagttggtcttattggaacaattgca
aattatatatgtggagaaaaaattcatacagaaagaacaaccccagaatcattggaactt
caagagttatttggagaaatggttgaaaaaggagttgaatactgtgttatggaggtgtcg
tcacattcattagcattagatagggtttatggtgtaaaatttgagtgtggtatctttaca
aatcttacaagagatcatcttgattttcacaagacttttgaaaattactacgatgcaaaa
tttaaattgtttgaaagaagctgtataaaagtaataaatgttgacgataattatggaata
caggtgctaaaagattgccaaaaattaaatgctgaaaatatttactctttttcagtaaaa
agtgattctgattataaagcatatgatgaacttatgggaagtagagatattaaatttaaa
gttgtccttgatgaggaagaagaatttattcttggaattcctggtgaatataatatttat
aatgctttaggtgcaattggagtctgtcacaagatgggaatagctattgaagctataaaa
gaaggtatagaaaatgccttggtacctggtagatgtgaaagagtaggtaaagaatataat
cttccttatgaaataataatagactatgcacatacacctgacggtcttgaaaatatttta
aaaactgcaaaagcattcactaaaggtaagcttatcgctatttttggatgtggtggtgat
agagataaagtaaaaaggcctcaaatgggtaaaattggtatagatattgcggatttagct
gtaattacatccgataatcctagaagtgaggatccaatggcaataatagaggatattaaa
gctggtcttgataaagataattatataattattgaaaatagacatgatgcaataaagaag
gcaattgaattagctgagaaagatgatgttatagtaatagcaggaaaaggacatgagaca
tatcagatcttaaaagataaaactatacactttgatgaaagagaagtagtcaaagaaata
ttagataatataaaaagatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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