KEGG   Clostridium baratii: U729_1110
Entry
U729_1110         CDS       T03506                                 
Symbol
serS
Name
(GenBank) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
cbv  Clostridium baratii
Pathway
cbv00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cbv00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    U729_1110 (serS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cbv01007]
    U729_1110 (serS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbv03016]
    U729_1110 (serS)
Enzymes [BR:cbv01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     U729_1110 (serS)
Amino acid related enzymes [BR:cbv01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   U729_1110 (serS)
Transfer RNA biogenesis [BR:cbv03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    U729_1110 (serS)
 Prokaryotic type
    U729_1110 (serS)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N TMF_TATA_bd Laminin_I DUF641 FlgN Syntaxin DUF16 ERM_helical DUF883
Other DBs
NCBI-ProteinID: AIY84973
UniProt: A0A0A7FZE2
Position
1200265..1201539
AA seq 424 aa
MLDLKRIRNNPEEIKLALTNRGEDFDVSVIDELVKLDEERRNILSEVEVLKSKRNQVSAE
IPKLKKAGEDVAPIMAEMKELGNEIKEHDSNLASVNEKIEYIMLRIPNIPNPQVPEGESD
ADNVEIKRWGETPNFNGEPKAHWDLGTDLGILDAERGGKVAGSRFTFYKGLGARLERAVL
NYFMDKHSDEHGYTEILPPYMVNRASMTGTGQLPKFEEDAFKVENNGFFLIPTAEVPVTN
MYRDEVLNAEELPVKHVAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYNE
LEKLVRDAEEVLEELGLPYRKVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNFED
FQARRANIKYREGKEKPQFVHTLNGSGLAVGRTVAAILENYQNEDGTVRVPDALKRYMGV
DVIK
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgttagatttaaaaagaatcagaaataatccagaagaaataaaattagctttaactaat
agaggagaagattttgatgtatctgtaatagatgaattagttaagttagatgaagaaaga
agaaatatattaagtgaagttgaagttttaaagagtaaaagaaatcaagtttcagcagaa
attccaaaattaaaaaaagcaggagaagatgtagctcctataatggctgaaatgaaagaa
ttaggaaatgaaataaaagaacacgatagtaatcttgcttcagttaatgaaaaaatagaa
tatataatgcttagaattcctaacataccaaatccacaagtacctgaaggtgaatcagat
gctgataatgttgaaattaaaagatggggagaaactccaaactttaacggtgaaccaaaa
gctcactgggatttaggtacagatcttggaatattagatgctgaaagaggcggaaaagtt
gcaggttcaagatttactttttataaaggattaggagcaagacttgaaagagctgttctt
aactactttatggataaacactcagatgaacatgggtatacagaaatattacctccatac
atggttaatagagcaagtatgacaggtacaggacaattacctaagtttgaagaagatgca
tttaaagtagaaaataatggattcttcttaataccaacagcagaagttccagtaactaat
atgtatagagatgaagtcttaaatgcagaagaacttccagtaaagcatgttgcatattca
gcttgttttagagcagaagcaggatcagctggtagagatactagaggacttataagacaa
caccaattcaataaagttgaattagttaaattcgttaaaccagaagaatcatataatgaa
ttagagaagttagttagagatgctgaagaagtattagaagaattaggattaccatataga
aaagttagaatatgtaaaggtgatttaggatttacagctgcattaaaatatgacttagaa
gtttggatgccaagttacaatagatatgttgaaatatcaagttgttcaaactttgaagat
ttccaagctagaagagctaacatcaaatatagagaaggtaaggaaaaaccacaattcgtt
catacattaaatggttcaggtcttgcagttggtagaacagtagctgctatacttgaaaac
tatcaaaatgaagatggtactgtaagagttccagatgcattaaagagatacatgggtgta
gatgtaattaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (31)   

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