KEGG   Cupriavidus basilensis: RR42_s0197
Entry
RR42_s0197        CDS       T03642                                 
Name
(GenBank) Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
cbw  Cupriavidus basilensis
Pathway
cbw00010  Glycolysis / Gluconeogenesis
cbw00020  Citrate cycle (TCA cycle)
cbw00260  Glycine, serine and threonine metabolism
cbw00280  Valine, leucine and isoleucine degradation
cbw00310  Lysine degradation
cbw00380  Tryptophan metabolism
cbw00620  Pyruvate metabolism
cbw00630  Glyoxylate and dicarboxylate metabolism
cbw00640  Propanoate metabolism
cbw00785  Lipoic acid metabolism
cbw01100  Metabolic pathways
cbw01110  Biosynthesis of secondary metabolites
cbw01120  Microbial metabolism in diverse environments
cbw01200  Carbon metabolism
cbw01210  2-Oxocarboxylic acid metabolism
cbw01240  Biosynthesis of cofactors
Module
cbw_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cbw_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cbw_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
cbw_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
cbw_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:cbw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RR42_s0197
   00020 Citrate cycle (TCA cycle)
    RR42_s0197
   00620 Pyruvate metabolism
    RR42_s0197
   00630 Glyoxylate and dicarboxylate metabolism
    RR42_s0197
   00640 Propanoate metabolism
    RR42_s0197
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RR42_s0197
   00280 Valine, leucine and isoleucine degradation
    RR42_s0197
   00310 Lysine degradation
    RR42_s0197
   00380 Tryptophan metabolism
    RR42_s0197
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RR42_s0197
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbw04147]
    RR42_s0197
Enzymes [BR:cbw01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RR42_s0197
Exosome [BR:cbw04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RR42_s0197
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 DAO FAD_oxidored FAD_binding_2 GIDA 2-Hacid_dh_C HI0933_like FAD_binding_3 AlaDh_PNT_C XdhC_C NAD_binding_7 3HCDH_N
Other DBs
NCBI-ProteinID: AJG21795
UniProt: A0A0C4YGG7
Position
secondary:complement(212765..214165)
AA seq 466 aa
MANSSFDLIVVGGGPGGYVAAIRATQLGMKTALVEKAHLGGICLNWGCIPTKALLRSADV
LRLVKDAAAYGVHAAPPTADLPAMVARSRAVAAQLNKGVAHLMKKNGVTVLNGHGRLAGK
GKLEVTATDGKTRIVSSAHILLATGARARQLPALPADGKTVWTYRDALAPPVVPKRMLIV
GAGAIGIEFASFYRAVGAEVTVVEMAQRILPVEDADICAQVASSLTREGIVLHTGTGIQS
AERKGQGWSIELQGGKSGGARVDVDVVLVAAGIVGNVEDLGLERTAVKVEKTHIVTDGFG
RTDEPGVYAIGDVAGPPWLAHKASHEGVICVERIAGLHPHALDATRIPACTYSHPQVASV
GLTEAQARERGHPVKVGKFPFAGNGKAIAMGSTAGLVKVVFDAGSGELLGAHMVGDEVTE
MIQGYAIAQTLETTEADLMAAVLPHPTMSEAMHEAVLAAYGRALHI
NT seq 1401 nt   +upstreamnt  +downstreamnt
gtggcgaactcctcatttgacctgatcgtcgtgggcggcggcccgggcggctacgtggcc
gccatccgcgccacgcagctaggcatgaaaaccgcgctggtcgagaaagcgcacctgggc
gggatctgcctgaactggggctgcattcccaccaaagcgctgttgcgcagcgccgatgtg
ctgcggctggtcaaggacgcagcggcctacggtgtgcatgccgcgccgcccaccgccgac
ctgccggccatggtggcccgctcccgcgcggtggccgcgcagctcaacaagggcgtggcc
cacctgatgaagaagaacggcgtgaccgtgctcaacggccacggacggctggcgggcaag
ggcaagctagaagtcaccgcgacggatggcaagacgcgcatcgtgtcgtccgcccacatc
ctgctcgccaccggcgcacgcgcccgccagctgcccgcgctgccggcggacggcaagacg
gtctggacctatcgcgacgcgctggcgccgcccgtggtgccaaagcgcatgctgatcgtt
ggcgccggtgccatcggcatcgagttcgccagcttctatcgcgcggtgggtgccgaggtg
acggtggtggagatggcgcagcgcatcctgccggtggaagatgccgacatctgcgcgcag
gtggcaagcagcctgacccgggaaggcatcgtgctgcatacgggcaccggcatccagagc
gctgagcgcaaggggcagggctggtccatcgagctgcaaggcggcaagtccggcggcgcg
agagtcgacgtcgacgtcgtgctggtggccgcaggcattgtcggcaacgtggaagacctc
ggcctggagcggaccgccgtcaaggtcgagaagacgcatatcgtcaccgacggcttcggc
cgcaccgatgagcccggcgtgtatgccatcggcgacgtggcgggcccgccgtggctggcg
cacaaggccagccacgaaggcgtgatctgcgtggagcggattgccgggctgcatccgcat
gcgctcgatgccacacgaattccggcctgcacctacagccatccacaagtggcgagcgtg
ggactcaccgaggcacaggccagggagcgcggccatcccgtcaaggtcggcaagttccct
ttcgccggcaacggcaaggccattgccatgggcagcactgccggcctggtgaaggtggtg
ttcgacgcaggcagcggcgaactgctcggcgcccatatggtgggcgacgaggtcaccgag
atgatccagggctacgccatcgcgcagacgctggagaccaccgaggccgacctgatggcc
gctgtcctgccgcacccgaccatgtccgaggccatgcacgaagccgtgctcgcggcctac
gggcgcgcactgcatatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (85)   

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