KEGG   Clostridium beijerinckii ATCC 35702: Cbs_4321
Entry
Cbs_4321          CDS       T03415                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cbz  Clostridium beijerinckii ATCC 35702
Pathway
cbz03410  Base excision repair
cbz03430  Mismatch repair
cbz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Cbs_4321
   03430 Mismatch repair
    Cbs_4321
   03440 Homologous recombination
    Cbs_4321
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbz03400]
    Cbs_4321
DNA repair and recombination proteins [BR:cbz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Cbs_4321
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Cbs_4321
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Cbs_4321
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 ADH_zinc_N
Other DBs
NCBI-ProteinID: AIU04663
Position
complement(4976954..4978720)
AA seq 588 aa
MAERWFIKNIKADYKYISKKYALSELVSRLIVNRNIISDEMIRSYINPDFDKFHEAREMK
DLEKSVDILREKIKAQNKIRIVGDYDVDGVISIYILYSALKRCNANVDYEIPDRIKDGYG
INMNIIKQAKEDGVDTILTCDNGISAIDQIKYAKELGITVIVTDHHDIPFVEKENNVREF
ISLSADAVVNPKQSECNYKFKQLCGAGVAFKLVEILYETFNIDKKECYKFIEFLAIATVC
DVVDLVDENRIFVKKGLELINSTTNLGLQELIRECELTEKTLSVYHLGFIIGPCINASGR
LDSAKRGLKLLLSDDEEEAVRLAKELVKLNEDRKDMTMNGVEAAVEIIEKSGMINDKVFV
IYIPDIHESLAGIIAGRIKEKYNVPTLVITKAEHGVKGSGRSIEEYNMFEELIKCKDLLE
KFGGHPMAAGFSLKEENIDEFRRRLNENTILKDEDLLRKVTIDSVLPLDAINYDVINDLE
RLEPFGKSNSKPLFAEKNINLLKATILGKNRNVLKLKLKTRMNKALDAIYFGDIEKFEEE
VSSKYGNEELQKLYNGEYNHVNLDLVFYPNVNEYNGNTTIQIVIQNYR
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggcagaaagatggtttataaaaaatataaaagctgattataaatacatatctaaaaaa
tatgcactttcagaattggttagtaggcttatagtaaacaggaatattataagcgatgaa
atgataagaagttatattaacccggattttgataaatttcatgaggctagagaaatgaaa
gatttagaaaaatcggttgatatactgcgtgagaaaataaaagctcagaataagatacga
attgttggagattacgatgttgatggtgtaataagtatttatattttatactcagcttta
aaaaggtgcaatgcaaatgtagattatgaaattccagatagaataaaagatggatatgga
attaatatgaatattataaagcaggcaaaagaagatggggttgataccatactgacttgc
gataatggtatatccgctatagaccaaataaaatacgcaaaagaattaggaattaccgta
atagttacagatcatcatgatataccatttgttgagaaagaaaataacgtcagagaattt
ataagtttaagtgctgatgctgtagtaaatccaaagcaaagtgaatgcaattataaattt
aaacaattgtgtggagcgggtgtagcatttaagcttgtagaaattctttatgagactttt
aatatagataaaaaagaatgctacaaattcatagaatttttggcaatagcgacagtttgc
gatgttgtagatttagttgatgagaataggatatttgttaaaaagggattagaacttatt
aacagtacaactaacttaggactacaagaattaataagagaatgcgaattaacagaaaaa
actttatcggtatatcatcttggatttattatagggccatgcataaatgcttcaggaagg
ctagattcggctaaaagaggattgaaattattgctctcagatgatgaagaggaagcagta
aggctcgcaaaagaattagttaaattaaatgaagatagaaaagatatgaccatgaatggc
gtcgaggctgctgttgaaatcatagagaaaagtggaatgataaatgataaagtatttgtt
atctatattcctgatatacatgaaagtttagcaggtataatagcaggaagaataaaagaa
aaatataatgttccaactttggttataacaaaagcagaacatggtgtgaagggttcagga
agatcaatagaagaatacaatatgtttgaagaacttattaagtgtaaggatctgcttgaa
aagtttggcgggcaccctatggctgcaggtttttcattaaaagaagaaaatatagatgaa
tttaggcgaagattaaatgaaaatacaattttaaaagacgaggatttattgagaaaagtt
actatagactcggttttgccgcttgatgctataaactatgatgtgataaatgatttagaa
agattagagccttttggtaaatcaaactctaaaccattgtttgctgagaaaaatattaat
ttattaaaggcaacaatacttgggaagaataggaatgtgctaaaattaaaactcaagacc
aggatgaataaagctctggatgccatttattttggtgatattgaaaagtttgaagaagaa
gttagcagtaaatatggaaatgaagaattgcaaaaactctataatggagaatataatcat
gtgaaccttgatttagtattttatccaaatgttaatgaatataatggtaatactactata
caaatagtaatacaaaattataggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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