KEGG   Cyanistes caeruleus (blue tit): 111941593
Entry
111941593         CDS       T05602                                 
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
  KO
K08533  RAR-related orphan receptor beta
Organism
ccae  Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccae03000]
    111941593 (RORB)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ccae03310]
    111941593 (RORB)
Transcription factors [BR:ccae03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    111941593 (RORB)
Nuclear receptors [BR:ccae03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   111941593 (RORB)
SSDB
Motif
Pfam: zf-C4 Hormone_recep OmpH
Other DBs
NCBI-GeneID: 111941593
NCBI-ProteinID: XP_023800506
Position
Z
AA seq 552 aa
MDGLCKGEEREERSLSSDAFLLNKAEGGLTALGRETDGAQIEVIPCKICGDKSSGIHYGV
ITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGR
MSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALARVYSSSISNGLNNLNNETGSTYSNG
HVIDLPKSEGYYSVDSAQPSPDQSGLDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLA
PGISMSEIGLYEGTQWLGEWLTFLPELKKDRIAQNIIKSHLETCQYTMEELHQLAWQTHT
YEEIKVYQSKTREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVV
LVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFS
SAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDEETLTKLIAKIPTITALCNLH
GEKLQMQKAELQMNHDVLGKNLAPLKPAANPSLISTVPGVHPAFLHLQFSSDLSPLFNII
DLIYVYVSKKTA
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggatgggctgtgcaagggtgaagagagggaggagagatccctctcctcagatgctttc
cttctaaacaaggctgagggcggtctaactgccctgggcagggagacggacggagcacaa
attgaagtgataccatgcaaaatttgtggtgataaatcctctggaatacactatggagtc
atcacatgtgaaggctgcaagggattctttcggaggagtcagcagaacaatgcatcctac
tcctgtccaagacagagaaactgtttaattgacagaaccaacagaaatcgttgccaacac
tgccgactgcagaaatgtcttgccctgggaatgtctcgagatgctgtgaaatttggaaga
atgtccaaaaagcagagggatagcttgtatgctgaagtgcagaagcaccagcagcgactg
caggaacagcggcagcagcagagtggcgaggcagaagccctcgccagggtttacagcagc
agcatcagcaatggcttgaacaatctgaataacgaaaccggcagcacctactcaaacggg
catgtcatcgatctgccgaagtctgagggctattatagcgtggattctgcccagccctcc
ccagaccagtcggggttagacatgactggaatcaaacagataaagcaggaacctatctat
gacctcacctctgtaccaaacttgtttacctatagctctttcaacaacgggcaattagct
ccagggatatccatgagtgaaatcggcctgtatgaaggtacccaatggcttggagaatgg
cttacattcctaccagaattaaagaaagatcgaattgcacagaatatcattaaatctcat
ttggagacatgtcagtatacaatggaggaattacatcagctagcatggcagacccacaca
tatgaagaaataaaggtttaccagagcaagacgagagaagctctgtggcagcagtgtgcc
attcagatcacccatgctatccagtacgtggtggagtttgcaaagcgcattacaggcttc
atggagctctgccagaatgaccaaattctccttcttaagtcaggctgcttggaagtggtt
ttggtgagaatgtgccgtgccttcaacccacttaacaatactgttctgtttgaaggaaag
tatggagggatgcaaatgtttaaagctttgggttctgatgatctggtaaatgaagcattt
gactttgcaaagaatttgtgttccttacagctgactgaggaggagattgccttgttttca
tctgctgttctgatatcaccagatcgagcctggttaatagagccaaggaaggtccagaag
cttcaggaaaagatttactttgcacttcaacatgttattcagaagaaccacctcgatgag
gagacattgacaaagttaatagccaagataccaacaattactgcactttgcaacttgcac
ggagagaaactgcagatgcaaaaagcagaactgcaaatgaatcatgacgtactgggtaaa
aatctggctccattgaaaccagcggcaaacccttcactgatttcaacagtgccaggagtt
catccagcatttttacatctgcaattctcttctgatctttctcccttgtttaatataatt
gaccttatttatgtgtatgtgagtaaaaagacagcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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