KEGG   Cajanus cajan (pigeon pea): 109788372
Entry
109788372         CDS       T04868                                 
Name
(RefSeq) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ccaj  Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccaj03016]
    109788372
Enzymes [BR:ccaj01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     109788372
Transfer RNA biogenesis [BR:ccaj03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    109788372
 Prokaryotic type
    109788372
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 109788372
NCBI-ProteinID: XP_020202671
Position
2:complement(5632751..5636496)
AA seq 602 aa
MENSDTMLTTSSLPPPPPVAVEEPEPKKLKMSTTTSDDEECATTTGSKIRYKRHKVAIFF
AYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGIPKRYDWARSARTDKGVSAVG
QVVSGRFYIDPPGLVDRLNSNLTSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDP
CCHRDRETVMASLGSGNELVKCFECSERGRKVVGLVGNRKHNLELEAMDVDAGISSNKNV
VVDSSVTDDVGVSLSKVDDNHLNEASVNDNTGDVNSKTDIETVIPVREEGTPLNDESVKN
SDILEEEKVNGEDESTNGSGFCYGEKERERFNKILKYFVGTHNFHNFTTRTKAEDPAARR
YIISFNANITLVVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDKAFQQD
VNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKDYEKEAEEFKMKYIYSHISSTEQ
KEGTVALWLHSLNHRNYPDLRIVNEEAIPDNNRADIEEAIPDNKRADIVNDNKRAAIEEP
INDNKRAAIEEAINDNKRADIEETITDNKRVDIEEAVDDNKRADIEDAITDNKSADPEVM
TE
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggaaaactcagatacaatgctgacaacttcatccttgcctccaccacctccagtagct
gtggaggagccagagcccaagaagttgaagatgtccaccacaacctctgatgatgaagaa
tgtgcaactaccacaggcagtaagataagatacaaacgccataaggtagctattttcttt
gcttactgtggtgttggctatcagggtatgcagaaaaaccctggtgcaaagaccattgaa
ggtgatctagaagaagctttatatgtgtctggagctgtacctgaacaggatcgtggaatt
cctaaacggtacgactgggctcgctctgctagaacagataaaggagttagtgctgttggt
caggttgtctcaggccgattctatattgatccacctggccttgttgaccgccttaattca
aatcttacctctcagataaggatctttggttacaagcgtgtgacaggttcttttaatgcc
aagaagttctgtgatcggaggaggtatgtctatctcattcctgtgtttgctcttgatcca
tgttgtcatcgtgatagagagactgtcatggctagtttgggatctggaaacgagcttgtt
aagtgtttcgagtgttctgagagaggtcgaaaggtggtaggattagttggtaatcgtaag
cacaatctggaactagaagctatggatgttgatgctggtatttcatcaaacaaaaatgtt
gtggttgattctagtgttacagatgatgtgggggtttctttgagcaaagttgatgataat
catttaaatgaggcatctgtgaatgataatacgggtgacgtgaactctaaaactgatatt
gagactgtgattcctgttcgtgaagagggtactcctttgaatgatgaatctgtaaaaaat
tcagacatccttgaggaagaaaaagtgaatggagaggatgagtctaccaatggaagtggg
ttctgttatggtgagaaggagagggagagatttaacaagattttaaagtattttgtaggg
actcataatttccataacttcaccactagaacaaaagctgaggaccctgctgctcgtcgt
tacattatttcattcaatgcaaacatcactcttgtagttgagggcatggaatttgtaaag
tgcgaggttgtgggacagagcttcatgcttcatcagatacgcaagatgattggtttggca
gtggcaatcatgagaaattgtgcaccggagtcacttattgacaaagcttttcagcaggat
gttaacattaatgtgcctactgcccctgaggttggattatatttggatgagtgcttcttt
tcttcatataaccagaagtggaaagatagccatgaagagttgtcaatgaaagattatgag
aaagaagctgaggagttcaaaatgaagtacatatattctcatatctcttccacggaacag
aaggaaggaactgttgctctttggttacattctttgaaccatagaaattatccagatctg
cgcattgtcaatgaggaagccatccctgataacaatagagctgatattgaggaagccatc
cctgataacaagagagctgatattgtcaatgataacaagagagctgctattgaagaaccc
atcaatgataacaagagagctgctattgaagaagccatcaatgataacaagagagctgat
attgaagaaaccatcactgataacaagagagttgatattgaagaagctgtcgatgataac
aagagagctgatattgaagatgccatcactgataacaagagtgctgatcctgaagttatg
actgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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