KEGG   Cajanus cajan (pigeon pea): 109790893
Entry
109790893         CDS       T04868                                 
Name
(RefSeq) putative tRNA pseudouridine synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ccaj  Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccaj03016]
    109790893
Enzymes [BR:ccaj01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     109790893
Transfer RNA biogenesis [BR:ccaj03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    109790893
 Prokaryotic type
    109790893
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 109790893
NCBI-ProteinID: XP_020205732
Position
2:complement(9966820..9971195)
AA seq 514 aa
MVTNCVSSSPHFLSIPTRVRENRIPTLVAMLFSSSSSSLLLPPTLFKCLCASTHSLPTPS
PSLHKWEPFLKKKVVMRVGYVGTDFRGLQMQRDEHRLSTVEKELETAIFKAGGMRDSNFG
DLNKVKWGRSSRTDKGVHSLATMIAFKMEIPENAWKDDDNGIALANRINSYLPSTIRVFS
ILPSTKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHISEFNSILNVFEGEHPFH
NYTVRSKYRKKYPVRQSSGNDGMSDSIGSASLASTCEPESEEIDDDDDFVSGRPATVSDE
EESHKPPETTESNGLSSQNSSLVVRARWLYEPDEADRLNASHFRKVFHCSCGKLETSLGY
DYVEVHIWGDSFMLHQIRKMVGTAVAVKRKLIPRDIILLSLNKFSRIVLPLAPPEVLILR
GNAFKMRSRPGSFTRQEMVSMVESEQILDAVDEFYTSVVLPEVSKFLDSSKSPWEKWIEN
LDRYSGIPDVELDEVRKAWKTWKENFKAKSASDA
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggtaactaactgcgtttcttcttcgcctcactttctttcaattccaactcgtgtaaga
gaaaacagaatacccactttggtggcaatgctattctcttcttcttcttcttcactgctt
ctgcctccaacgctcttcaagtgcttatgtgcttccactcactcccttccaaccccttct
ccctccctccacaagtgggaacctttcctcaagaaaaaggtcgtaatgagagttggatat
gttggaaccgattttagaggtctgcagatgcaacgggatgaacataggttatccactgtc
gagaaggaactggaaacggcgatattcaaggccggtggcatgcgtgatagtaattttggg
gacttgaacaaagtgaaatggggcagaagtagcaggactgataaaggagtccactctctg
gcaacaatgatagcctttaagatggaaatccctgagaatgcatggaaagatgacgacaat
ggcattgcacttgcaaaccgcattaactcttatcttcctagtactatcagggtttttagc
atattgccttcaacgaagagattcgaccctagaagagagtgcaatttgcggaaatattct
tatctcctccctgctgatataataggaatccagagtcattttagcgaggatgaaattgat
tttcatatttcagagttcaacagtatacttaatgtttttgagggtgagcatcctttccat
aattatactgttaggtccaagtacaggaaaaaataccctgtaaggcaatcatctggaaat
gatggcatgtcagacagtataggatcagctagtttggcatcaacttgtgagccagagagt
gaggaaattgatgatgatgatgattttgtgagtggtagaccagccactgtaagtgacgag
gaagagagtcacaagcctccagagactactgaatccaatggcttgagtagtcaaaactct
agtttagtagttcgtgcaagatggctatatgaaccagatgaagcagatagattaaatgct
tcccatttcagaaaggtttttcattgttcttgtgggaagttggaaacatctcttggttac
gattatgttgaggtccatatatggggagactccttcatgttacatcaaatacgcaaaatg
gttgggactgccgtggctgtaaagcgcaagttaatcccaagagacatcattttgttgtca
ctcaacaagttttcaaggatcgtcctcccgctcgccccgccagaagttctgattctgagg
ggaaatgctttcaaaatgagatcaagacctggaagctttacacggcaagaaatggtgtct
atggttgaatcagagcaaattctcgatgcagttgacgagttctacacgtctgttgtgttg
cctgaagtgtcaaagttcctagactcgtcaaagtctccgtgggaaaaatggattgagaat
ttggataggtattcaggcattccagatgttgagttggatgaagtcagaaaggcttggaag
acatggaaggaaaatttcaaggcaaagtcagcatcagatgcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system