KEGG   Cajanus cajan (pigeon pea): 109808737
Entry
109808737         CDS       T04868                                 
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03030  DNA replication
ccaj03410  Base excision repair
ccaj03420  Nucleotide excision repair
ccaj03430  Mismatch repair
ccaj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109808737
   03410 Base excision repair
    109808737
   03420 Nucleotide excision repair
    109808737
   03430 Mismatch repair
    109808737
   03440 Homologous recombination
    109808737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccaj03032]
    109808737
   03400 DNA repair and recombination proteins [BR:ccaj03400]
    109808737
Enzymes [BR:ccaj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     109808737
DNA replication proteins [BR:ccaj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    109808737
DNA repair and recombination proteins [BR:ccaj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      109808737
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     109808737
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_2 divDNApol
Other DBs
NCBI-GeneID: 109808737
NCBI-ProteinID: XP_020227443
Position
11:44958437..44972665
AA seq 1085 aa
MKKNGSRKRAPPPSQPPPAKHPSMTQEEEFMDEDVFLDETLLSADEESLILRDIEQRQAL
ATRLSKWTRPPLDADYVVQSRSVVFQQLEIDYVIGESHKELLPNSSGPAAVIRIFGVTKE
GHSVCCNVHGFEPYFYVCCPPGMGPDDISRFHQTLEGRMREANRNSNVGKFVRRIEMVQR
RSIMYYQQSNSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFLTYESNVLFALRFM
IDCNIVGGNWIEVPAGKYNKTARSLSYCQLEFDCLYSELISHPPEGEYSKMAPFRILSFD
IECAGRKGHFPEPTHDPVIQIANLVTLQGEDQPLIRNVMTLKSCSPIVGVDVMSFDTERE
VLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAANLKIAEFPILGRIRNSRVRVKDTTF
SSRQYGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISD
LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVL
SQLLRKARQKNLVLPNVKQAGSEQGTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAY
NLCYCTLVTPEDARKLNIPPESVNRTPSGETFVKSNLQKGILPEILEELLTARKRAKADL
KEAKDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSYGRQMIEHTKKL
VEDKFTTLNGYEHNAEVIYGDTDSVMVQFGVSAVEEAMNLGREAAEYISGTFTKPIKLEF
EKVYYPYLLISKKRYAGLFWTKPDNFDKMDTKGIETVRRDNCLLVKNLVNDCLHKILIDR
DIPGAVQYVKTAISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATA
PNVGDRVPYVIVKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPILRIFEPILK
NASKELLHGSHTRSISISTPSNSGILKFAKKQLTCIGCKALLSNGHHTLCSHCKGREAEL
YCKTVAQVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARSQL
DRWNF
NT seq 3258 nt   +upstreamnt  +downstreamnt
atgaagaaaaacggctcccggaagcgcgcgccgccgccgtcgcaacccccgccggcgaag
catccctcgatgactcaggaagaagagttcatggacgaagacgtgttcctggacgaaacc
ctcctttccgccgacgaagagtccctcattctccgcgacatcgagcagcgccaggccctc
gccacgcgcctctccaagtggacgcgtcctcctctcgacgccgactacgtcgtccaatct
cgcagcgtcgttttccagcagctggagattgattacgtgatcggagagagtcacaaggag
ttgctgccgaactcgtctggacctgctgccgttatcagaatatttggagttactaaggaa
ggacacagtgtttgctgcaatgttcatgggtttgagccatatttctatgtctgttgccca
cctggaatgggtccagatgatatctcccgttttcatcaaactcttgagggaaggatgaga
gaagccaatagaaacagtaatgtgggaaaatttgttcgccgcattgaaatggtgcagaga
aggagtattatgtactatcaacaatccaattcccaaccctttctcaaaattgtagttgca
cttccaacaatggttgccagctgtcgtggcatacttgacaggggtattcagcttgatggt
ctgggaatgaagagcttcttgacttatgaaagcaatgtactttttgcccttcgcttcatg
attgattgtaacatagttggtggaaattggattgaagttccagctggaaaatataataag
acagcaagaagcttgtcttactgccagttagagtttgattgcttgtattccgaattgatt
agtcatcctccagaaggggaatattcaaagatggctccattccgcatattgagttttgac
attgagtgtgctggtcgtaaaggtcattttcctgagcctactcacgatcctgttatccag
attgctaatttggttactttacaaggagaggaccagccattaattcgtaatgtgatgacc
cttaaatcatgttctcctatcgttggtgttgatgtgatgtcatttgatacagaaagagaa
gtcctgctagcttggagggattttattcgtgaagtggatccagatattattattggatat
aacatctgcaaatttgacttaccatatcttattgagagagctgcgaatctgaagatagca
gaatttccaattctgggccgtatcaggaacagtagagttcgagtaaaggatacaactttc
tcgtcaaggcagtatgggaccagggaaagtaaagaagttactgtagaagggagagttcag
tttgatttactccaggttatgcaaagagactacaaattaagttcttattcattgaattct
gtgtcagcccacttcctttctgagcagaaagaggacgttcatcattcaattatatctgat
cttcagaatggaaatgcagaaactcggaggcgccttgctgtgtattgtttgaaggatgca
tatctccctcagcggcttttggataaattgatgttcatttacaattatgtggagatggct
cgagtaacaggtgtcccaatttcttttctactttccaggggccaaagcattaaggttctt
tctcaacttcttaggaaggcaagacagaagaatcttgtccttcctaatgtcaaacaggct
gggtctgaacaaggaacatttgaaggtgccactgtattggaggcaagggcgggattttat
gaaaaacctattgctactttagattttgcatccttgtatccatctattatgatggcctat
aatttatgttattgcactctggtgactccagaagatgctcgcaagcttaacatccctcca
gagtctgtgaacagaactccatctggggaaacatttgttaaatcaaatttgcagaaggga
atacttcctgaaattcttgaagagctattaacagcccggaaaagggcaaaagcagacttg
aaggaggcaaaagatccccttgagaaggcagtgctagatggtagacagctggccctgaaa
attagtgcaaattccgtgtatgggtttacaggggctaccattggtcagttaccatgtcta
gagatatcatcaagtgtaacaagctatggtcgacaaatgattgagcacacaaaaaaactc
gtggaagataaatttacaacacttaatggctatgaacacaacgctgaggtaatatatgga
gacacagattcagtcatggtacaatttggtgtgtctgccgtagaagaggcaatgaacttg
gggagagaagctgctgaatatattagtggaactttcacaaaacccatcaaactagaattt
gagaaggtttactatccatatctcttgatcagcaagaagagatatgctggtttgttttgg
acaaaaccagacaactttgacaaaatggacactaaaggtattgaaacagttcgaagagac
aattgtttattggtcaaaaacctggtgaacgattgccttcacaaaatactgatcgacaga
gacattcctggggcagttcagtatgtcaagactgcaatttcagatcttctcatgaatcgc
atggatttatcacttctggtcattacaaagggtttaacgaagacaggagatgattatgaa
gtaaaggcagctcatgttgaacttgctgaaaggatgcgcaagcgagatgctgccactgct
ccaaatgttggagatagagtaccttatgttattgttaaagctgcaaaaggtgcaaaggca
tatgagagatcagaggatcctatctatgtgctagagaacaacataccaatagatccccaa
tactatcttgagaatcaaattagcaagccaattctgagaatttttgagccaattctgaag
aatgctagcaaggaacttctccatggaagccatacaagatctatttctatttctaccccg
tcaaacagtggcatattgaaatttgctaagaaacagcttacgtgcattggttgtaaagct
ttacttagcaatggtcatcacactctctgttcacattgcaaaggaagggaagctgagctg
tactgtaaaacagtagctcaagtgtctgatctggagatgctttttgggaggttgtggaca
cagtgtcaggagtgccaaggttcacttcatcaggatgttctctgcacaagtcgggattgt
ccaattttctaccgacggaaaaaggcacagaaagatatggccgaagcaaggtcgcaattg
gaccgatggaacttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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