KEGG   Castor canadensis (American beaver): 109684778
Entry
109684778         CDS       T04791                                 
Symbol
Ldb3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109684778 (Ldb3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ccan04990]
    109684778 (Ldb3)
Domain-containing proteins not elsewhere classified [BR:ccan04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   109684778 (Ldb3)
SSDB
Motif
Pfam: LIM DUF4749 PDZ PDZ_6 PDZ_2 DUF3854
Other DBs
NCBI-GeneID: 109684778
NCBI-ProteinID: XP_020016913
UniProt: A0A8B7UB45
Position
Unknown
AA seq 614 aa
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPVAISTAAPPIQSPLPVISHQKVVVNSPANADYQE
RFNPSALKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGSD
FSGASPLASLPVKDLAVDSASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMT
GTEYMQDPDEEALRRSRPQASAYSPAAASSPAPATHTSYSESPAAPAPKPRVVTTASIRP
SVYQPVPASTYSPSSGANYSPTPYTPSPAPAYTPSPAPTYSPSPAPTYMPSPAPNYNPTP
SAAYSGGSVESASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGAPAYSPTGPQVTPLAR
GMVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ
NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
DKPLCKKHAHAINV
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgtcttacagtgtaaccctgactgggcctggaccctggggcttccgtctgcaggggggc
aaggacttcaacatgcccctcactatttcccggatcacaccaggcagcaaggcggcccag
tcccagctcagccagggagacctcgtggtggccatcgacggcgtcaacacagacaccatg
acccacctggaagcccagaacaagatcaagtctgccagctacaacctgagtctcactctg
cagaagtcgaagcgtcctgttgccatttccacagcagcacccccaatccagtctcctctg
ccagtaatctcccaccagaaggtggtagtcaactctccagccaacgccgactaccaggaa
cgcttcaatcccagtgctctgaaggactcagccctgtccacccacaagcccattgaggtg
aaggggctgggcggcaaggccaccatcatccatgcccagtacaacacacccatcagcatg
tactcccaggatgccatcatggacgccatcgctgggcaggcccaagcccagggcagtgac
ttcagtggggcgtcgccgctggcgagtcttcctgtgaaggatttagcagtggacagtgcc
tctccagtgtaccaggctgtgatcaagaaccagaacaagccagaagacgaggctgatgaa
tgggcccgacggtcctccaacctgcagtctcgctccttccgcatcctggcccagatgaca
gggacagaatacatgcaagaccctgatgaagaagctctgcgaaggtcaaggccccaggct
tctgcctacagccctgcagcagcctcctctccagcaccagccactcataccagctacagc
gagagtcctgctgcccctgcacccaagccccgggttgtcaccactgccagcatccggcct
tctgtctaccagccagttcctgcatctacctacagcccatcctcaggagccaattacagt
ccgactccctacaccccctcgcccgcgcctgcctacaccccctcgcccgctcccacttat
tccccctcccctgcaccaacctatatgccatcgcctgccccaaactataaccccacaccc
tcagcggcctacagcgggggctccgtggagtctgccagccgtcccccctgggtgaccgat
gacagcttctcacagaagtttgctcctggcaagagcaccacctccatcagcaagcagacc
ctgccccgaggggccccagcctacagcccaactggtccccaggtgaccccccttgccaga
ggcatggtccagagagccgagcgcttcccagccagcagccgaactccactctgcggccac
tgcaacaacgtcattcggggcccttttctggtagccatgggccgctcctggcatccagaa
gagttcaactgtgcctactgcaagacctccctggcagatgtgtgctttgtggaagagcag
aacaatgtttactgtgagcggtgttatgagcagttctttgccccactctgtgccaagtgc
aacaccaaaatcatgggggaagtgatgcatgcactgagacagacgtggcataccacctgc
tttgtctgtgcagcctgcaagaagccttttgggaacagcctcttccacatggaagatgga
gaaccctactgtgagaaagactacatcaatctgttcagcaccaaatgtcatggctgtgat
ttccctgtggaagccggtgacaagtttattgaagcactggggcatacctggcatgacacc
tgcttcatttgtgcggtctgccatgtgaatctggagggacagccgttctactccaagaag
gacaaacccctgtgcaagaagcacgctcatgccatcaacgtgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (43)   

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