KEGG   Castor canadensis (American beaver): 109689403
Entry
109689403         CDS       T04791                                 
Symbol
Nup88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
  KO
K14318  nuclear pore complex protein Nup88
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03013  Nucleocytoplasmic transport
ccan05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109689403 (Nup88)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    109689403 (Nup88)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccan03019]
    109689403 (Nup88)
Messenger RNA biogenesis [BR:ccan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109689403 (Nup88)
SSDB
Motif
Pfam: Nup88 DUF659 FliJ
Other DBs
NCBI-GeneID: 109689403
NCBI-ProteinID: XP_020023835
UniProt: A0A250YL41
Position
Unknown
AA seq 741 aa
MAAAEGSAGDGELWQTWLPNHVVFLRLQEGLKNQNPTEAEKPASSSLPSPPPLPPQLLMR
NLVFGLGGELFLWDGESSSFLVVRLRGLGGEEPALSQYQKLLCINPPLFEIYQVLLSPTH
HHVALIGIKGLMVLELPKRWGKNSEFEGGKATVNCSTTPIAERFFTSSTSLTLKHAAWYP
SEMLDPHIVLLTSDNIIRVYSLREPQTPTKVIILSEAEEESLILNKRRTYTASLGETAVA
FDFGPLAAVPKNVFGQKSKDEVVAYPLYILYENGETFLTYVSLLHSPGNIGKLLGPLPMH
PAAEDNYGYDACAILCLPCVPNILVIATESGMLYHCVVLEGEEEDDQTSEKSWDYRIDLI
PSLYVFECVELELALKLASGEDDPFDSDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLTW
IHKLHKFLGSDEEDKDSLQELAAEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGPTM
ICITSSCECLIRPLLSTVHPASPPLLCTREDAEVAESPLRILAEAPDSFEKHIRSILQRS
AANPAFLKSSEKDLAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLLCDQKKK
QLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKVLHSFHSQLPVLSDSERD
MKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQKPTITLSAYQRKCIQSILKE
EGEHIREMVKQINDIRNHVNF
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggcggccgccgaagggtctgcgggcgatggtgaactatggcagacctggttacctaac
cacgtcgtgttcttgcggctccaagagggactgaaaaaccagaatccaactgaagccgaa
aaaccggcatcttcatcattgccctcgccgccgcctctgccgccgcagttgctgatgaga
aatctggtgttcggcctcggcggagaactcttcctgtgggacggagaaagcagctccttc
ttagtggttcgccttcggggcctcggcggcgaggagcccgccctttcgcagtaccagaaa
ttgctttgcataaatccacccctatttgaaatttatcaagtcttgttaagtccaacacac
catcatgtagcacttataggaataaaaggacttatggtactagaattacctaaaagatgg
ggaaagaattctgaatttgaaggtggaaaagcaacagtgaattgtagtactactccaatt
gctgagaggtttttcaccagttctacctctctgactctaaagcatgctgcctggtatcca
agtgaaatgctggatcctcatatagtgctgttaacatcagacaatataataagagtttac
tctttacgtgagcctcaaactccaactaaggtaattatactttcagaagcagaagaggaa
agtttaattctcaataaaagaagaacatacactgcatctctaggagagacagcagttgca
tttgactttgggccattggcagcagtcccaaagaatgtatttggacagaaaagcaaagat
gaagtagtggcatacccactgtacatcttatatgagaatggggagaccttccttacatat
gttagtctgttacacagccctgggaatattggaaagctgctaggtccattgcccatgcac
cctgcagctgaagataactatggttatgatgcttgtgctatactctgcttaccctgtgtt
cccaacatattagtgattgcaactgaatcaggaatgctgtaccactgtgttgtgctagaa
ggagaagaagaagatgaccaaacctcagaaaagtcctgggattacaggattgacctcatt
ccttctttgtatgtgtttgaatgtgttgagttggagcttgccctgaaattggcatctgga
gaggatgatccctttgattctgacttttcttgtccaatcaaacttcaccgagatcctaag
tgtccttcaagatatcattgtactcatgaagctggtgtacacagtgtcgggctaacttgg
attcataaactccacaagtttcttggatcagatgaagaagataaggatagtttacaagaa
cttgctgcagaacagaagtgctttgtagagcacatcctttgtacaaagccattgccatgc
aggcagccagctccaattcgaggattctggattgtcccggacatattggggcccacaatg
atctgcatcaccagtagctgtgaatgcctcataaggcccttactaagtacagtacatccg
gcatctcctcccctgctgtgtacccgagaagatgctgaagtggcagaatctcccctccgt
attctggctgaagcaccggattcctttgaaaagcacattagaagcattttgcaacgtagt
gccgccaatccagcatttttgaaatcatctgaaaaagacttggctcctcctcctgaagaa
tgtcttcagctcatcagcagagccacccaggtgttcagagaacagtacattcttaagcag
gacctggcaaaggaagagattcagcggagggtcaaattattatgtgaccaaaaaaagaaa
caactggaagatctcaattattgtcgagaagagaggaaaagtctacgggaaatggctgag
cgtttagctgacaaatatgaggaagccaaggaaaaacaagaagatatcatgaacaggatg
aaaaaagtacttcacagttttcactctcaactcccagttctctctgatagtgagagagac
atgaagaaagaattacagctgatacctgatcaacttcgacatttgggcaatgccatcaaa
caggttaccatgaaaaaagactatcagcagcgaaagatggaaaaggtgcttagtcctcaa
aaacccaccattacactcagtgcctaccagcggaagtgcattcagtccatcctgaaagag
gagggtgaacacataagggaaatggtgaagcaaatcaatgatatccgaaatcatgtgaac
ttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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