KEGG   Cyprinus carpio (common carp): 109053444
Entry
109053444         CDS       T05134                                 
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
  KO
K11650  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109053444 (smarcd2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccar03021]
    109053444 (smarcd2)
   03036 Chromosome and associated proteins [BR:ccar03036]
    109053444 (smarcd2)
Transcription machinery [BR:ccar03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     109053444 (smarcd2)
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    109053444 (smarcd2)
   PBAF complex
    109053444 (smarcd2)
   GBAF(ncBAF) complex
    109053444 (smarcd2)
SSDB
Motif
Pfam: SWIB
Other DBs
NCBI-GeneID: 109053444
NCBI-ProteinID: XP_018926374
Position
Unknown
AA seq 449 aa
MSPSRGMPMGGHGGLWVPPLPGPSYSGAMPMRPGMPQAAMDPARKRLLQQQQQQPGGLMG
PRRGVKRRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQ
KRKLRIYISNTYTPGKPEGEEAEKVASWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDK
ELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLG
VHTQTRASIMQALWLYIKNNKLQDCHEKEYINCNRYFRQIFGCPRMRFSDIPMKLASLLQ
HPEPIVINHIISVDPNDQKKTACFDIDVEVDDPLKAQMTSFLSSTTNQQEITALEIKIHE
TIESINQLKTQRDFMLSFSNSPQDFIQDWLKSQSRDLKLMTDTVGNPEEERRTEFYHSPW
VKEAIGRYIFSKVQQRRQELEQVLGIRLT
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgtcacccagccgaggaatgccaatgggggggcatgggggtctatgggttcccccactg
ccaggtccgtcttatagtggagccatgcccatgcgacccgggatgcctcaagctgcgatg
gaccctgcccggaagagactccttcagcagcaacagcagcagcctgggggtcttatgggt
ccaagaaggggggtgaagaggcgtaagatggctgacaaagtcctcccacaacggatcagg
gatctggtcccagagtctcaggcttatatggaccttctggcctttgagagaaagctggac
cagacaattgctcgcaaacgaatggagatacaagaggccatcaaaaaacccatcacgcaa
aaacgcaaactgaggatttatatttctaacacctatacgcctggcaagccagaaggggag
gaggctgaaaaagtggcatcctgggaacttcgagtggaaggcaaactcctggaggatcct
ggaaaacagaaacgaaagttttcatcattctttaaaagcctggttatcgaactggacaaa
gaactttatggcccagacaaccacttggtggagtggcacagaatgcctacaactcaggag
acagatggatttcaggtgaagagaccaggggatgtgaatgtgaaatgtactctccttctc
atgctagaccaccagcctccacagtataagctggatccacgcctggcacgactgttgggc
gtgcacactcagaccagagccagtatcatgcaggccttgtggctctacatcaaaaacaac
aagctgcaagactgccatgagaaagaatacattaactgcaaccgatacttcagacagatt
tttggctgccccaggatgagattttcagatatccccatgaaacttgccagcctccttcag
caccctgaacccatcgtcatcaatcatatcatcagtgtggatcccaatgatcagaagaag
actgcatgctttgatatcgatgttgaggtggacgaccctctgaaggctcagatgaccagt
ttcctgtcatccacaactaatcagcaggagatcactgccctggagattaagatccatgag
actattgaatccatcaatcagttgaaaacccagagagacttcatgctcagcttcagtaac
agcccacaggatttcatccaggactggctcaagtctcagagccgagatctcaaattaatg
acagacactgtgggaaatccagaggaggagagaagaaccgagttttaccactcaccctgg
gtcaaagaagctattggacgctatatattttcaaaggtccagcagaggagacaggaattg
gagcaggtactgggaatcagactcacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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