KEGG   Cyprinus carpio (common carp): 109072590
Entry
109072590         CDS       T05134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: interferon-induced helicase C domain-containing protein 1-like
  KO
K12647  interferon-induced helicase C domain-containing protein 1 [EC:5.6.2.6]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04622  RIG-I-like receptor signaling pathway
ccar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    109072590
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109072590
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ccar04054]
    109072590
Enzymes [BR:ccar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109072590
Pattern recognition receptors [BR:ccar04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   109072590
SSDB
Motif
Pfam: RIG-I_C-RD CARD_2 RIG-I_C ResIII DEAD Helicase_C SWI2_SNF2 SNF2-rel_dom CARD DUF3638 AAA_22 AAA_19
Other DBs
NCBI-GeneID: 109072590
NCBI-ProteinID: XP_018944365
UniProt: A0A9Q9V6P2
Position
Unknown
AA seq 993 aa
MSCDQDAETRHVLGCFRDRLKRLIQVEPLLDLLHFLEPDRKDRIKAKFREEGDINAAAFL
IDEIIHSKNYARGWSRELIAALETVGCRHAAKYVLNSPPEPTEEAENDSCVRLIDLLQLT
LVSMKTGDVCAHCRALGLLTLEDQENIMKLTENQGNIGGARLLLKRLVKNEAGWFSKFLQ
ALEDTEHHDLVRELRGEPCNEDEAVSVKTVEEGEQSCSETMPVLPPVLSANSSLLSEDLD
SSVDSSGGLCTSADNEEVDMYKEGEEEDLTEDDDPSEESKRDIVLRDYQMEVARPALEEK
NIIICLPTGSGKTRVAVYITKKHLERKKQMGQPGKVVVLVNKVPLVEQHYKAEFGRFLKH
QYSVERVSGASQLKISFPQIIEQNDIIICTAQILENSLAKAKNGDEDGIKLSQFTLMVID
ECHHTKKGGVYNHIMIRYLSQKHKNQLLKKQEKSPVPLPQILGLTASPGVGGAMNQQMAE
EHILQICANLDAFTIKTTTFKEEEAKTPYKRIARAEERKEDPFGDVIKKIMDEIHTHADL
KPLCDPGTQYYEQWVVQKEQNAAKEENQMVRVCAEHLRQYNEALHQSNTIRMSDAFRFLN
KYHTEELKTKSSPDEEGTITITDTERFLFTLFKDNKAKLQELMGKPQYENNSLAQLKTSI
LKEFSTRERARGIIFTRTRLSAIALCQWIQRHRSLPVDQETQVDEVGVRASYLIGGGDQS
VVKPMTAAEQKDVLNKFRDGQINLLIATTVAEEGLDIAECNFVIRYCLVTNEIAMIQARG
RGRAEDSSYTLVAEAGSGVAERESVNEYREKMMSTAIVKVCKMNRADYEKKTREFQMQAI
IEEKVKIKKKLLKGMMKEPPSKISLSCRQCSVFVCSGEDIEKIENMHHVNVTKQFSKLFT
VRENASLQERLLDYETNGVIACKNCGQQWGSMMLYKXIECPCLHIKHFVVTYSSKKKTFS
KWSELPIKFPAFDYTQHADLLVEDSEEEDLETD
NT seq 2982 nt   +upstreamnt  +downstreamnt
atgagctgcgatcaggacgcggagacgcgtcatgtgctcggctgcttcagggacagactg
aagaggctcattcaggtcgagccacttctggatctgctgcatttcctcgaaccggatcga
aaggaccggattaaagccaaatttcgcgaggagggggacataaacgccgcggcgtttctg
attgacgagattattcactctaaaaactacgcacgaggatggtcgagggagctgatcgcc
gcgctggaaactgtcggctgcagacatgctgcgaagtacgtgttgaacagcccaccggag
cccacggaagaggccgagaacgacagctgcgtccggctgatcgacctcctgcagctcacg
ctggtcagcatgaagaccggagacgtgtgcgcgcactgccgcgcgctggggctcctgacg
ctggaggaccaggagaatattatgaagctcactgagaatcaagggaacataggtggcgct
cggctgctcctcaaaaggctggtgaaaaacgaagctggctggttttccaaattccttcag
gctctggaggatacggagcaccatgacctggtgcgtgagctgcggggagagccgtgcaac
gaggacgaggccgtgtcagtcaagactgttgaggagggtgaacagtcatgttcggagact
atgccggttctccctcccgttctctcagcaaacagctcgcttctgtcggaggatctggac
agcagtgtggacagcagcggcggtctgtgtacgtctgctgacaatgaagaggtcgacatg
tacaaagaaggtgaggaggaagatctcacagaggatgatgatccgtcagaggaaagtaag
agggatattgtactgcgtgactatcagatggaggtggcgagaccagctctggaggaaaag
aacatcatcatctgcctccctacaggaagtgggaaaaccagagttgctgtgtatatcact
aagaaacatttggagaggaagaagcagatgggacaaccggggaaagttgttgttttggtc
aacaaggttcccctggtcgagcagcactacaaggccgagttcgggcggtttctaaagcac
cagtactcagtggagcgggtcagcggagcctcgcagctcaaaatctccttcccacaaatc
atcgagcaaaatgacatcatcatctgcacagcacagattctggaaaactctttggccaaa
gccaagaacggtgatgaggacgggatcaaattatcacagttcactctgatggttattgac
gaatgccaccacacgaagaagggcggtgtgtataaccacatcatgattcgctacctaagt
caaaaacacaagaaccagctcctgaagaagcaggagaagagtccagttccgctccctcag
attctgggtctgacggcctcacctggtgtgggaggagccatgaaccagcagatggcagag
gaacacattctccagatctgtgcaaacctagatgctttcacaataaaaacaacgactttc
aaagaagaggaagccaaaacaccctacaaaaggattgcaagagcagaagagaggaaggag
gaccccttcggagacgtgatcaagaagataatggatgaaatccacacacatgcagacctg
aagcccctctgtgatcccggcacacaatactatgaacagtgggtcgtacagaaagagcag
aacgctgctaaggaagagaatcagatggtgcgcgtgtgcgctgaacatctccgtcaatac
aacgaggctcttcatcagagcaacaccatacgcatgtcagacgccttccgcttcctcaac
aaatatcacaccgaagagctcaagaccaaatccagcccagatgaggaaggcaccattaca
atcacagacacagagcgattcctcttcactttgttcaaagacaataaagcaaagctgcag
gagttgatgggaaagccgcagtatgaaaacaacagtctggcccagctgaaaaccagcatc
ctgaaggaattcagcaccagagagagagcgagaggcatcatattcacccggacccgcctc
agcgccatcgctctctgccagtggattcaacgccatcgctctctgccagtggatcaagaa
acccaagttgatgaagtgggagtcagagccagctatctgatcggtggaggagatcagagc
gtggtgaaaccgatgactgctgcagagcagaaggacgtgctgaacaagtttcgtgatggg
cagatcaatctgctaatagccaccactgtagcagaagagggtttggacatcgccgaatgt
aatttcgtcatacgctattgccttgtgaccaatgagatcgccatgattcaggcccgtggt
cgaggaagagcggaggacagtagttacacactggtggcggaggcaggatctggggtggca
gagagagagagtgttaacgaatacagggagaaaatgatgagcacagccatcgtcaaagtg
tgcaagatgaatcgagccgactacgagaagaaaaccagagagtttcagatgcaggccata
atagaggagaaggtgaagataaagaagaaactgctgaagggaatgatgaaggaaccgcca
tctaaaatcagcctgagctgcaggcagtgcagtgtgttcgtgtgctctggagaagacatt
gagaagattgagaacatgcaccatgtcaatgtcacaaagcaatttagtaagctgtttaca
gtccgagagaatgcatcactacaggagcgactcctggactatgagaccaatggagtcatt
gcgtgcaaaaactgcggacagcaatggggctcaatgatgctgtataaangcattgagtgt
ccctgcctccatatcaagcactttgtggtcacatacagctccaagaagaagacatttagc
aaatggagcgagttgcccataaagttccctgcgtttgattacactcaacacgccgatctc
ctcgtagaggactcagaggaagaagacttggaaactgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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