KEGG   Cyprinus carpio (common carp): 109101290
Entry
109101290         CDS       T05134                                 
Symbol
exosc10
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109101290 (exosc10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109101290 (exosc10)
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     109101290 (exosc10)
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 109101290
NCBI-ProteinID: XP_018970230
Position
26:14636263..14646385
AA seq 798 aa
MAASSSSAATVKPSDHSSPAEETEQETEFCRGFKDAEAFVKHGLGAVVSVPAFQQFCASQ
GDRLLHCMSQIMQHHGCRSHMSDRNRLTGLEDRFDLVVDSNDAILEKVGILLDEASGVSR
SQQPVMPAGYQPPKIVVSSWNRRGGERREETFHLLHAKNIQRPQLIILFVFQELMYKPLA
ESTCQFINTLDDLVALNEKLAKVSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLE
LRSEMYILNETFTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHHAARCLNLGRNSLD
HLLKVYCSVNSDKRYQLADWRIRPLLDEMLKYAQADTHYLLYVYDRVRADLFETSNSQPT
LIQQVWAKSRDLSLKKYVKPIFTEDSYMELYRKQKRSFNTQQLAAFRLLYTWRDTLGREE
DESTGYILPNHMMMKIAEELPKEPQGIMACCNPTPPLVRQQINELHQLIKQARETPLLKA
EVLAEKRKSMTPKRKPQPTSFGPHDTSRSSESDFLDLSSFETPTKPGVLFSEEDESVNQE
ERSLHGLIASAKISIFVEEEEEEAASPAHLSVAQQKAHSIMESFENPFRMYLPSKDIHIS
TNAKYDPSSKIYEIRNRWKLQSIAQQQQEAQEKRQAKEQAKKAQEERKKAKLSYQESLQN
VHTVRQQVMEAKQAGQKRESAASDVGEESLKPNVQVSKTESETSVADQSTKPAQKKKNVQ
EPEVPKQNFKPFDYSKSNFKIFAGKSKESSQFDPNRQAHGPKQKKNQKGQKKSAVGGRSM
SYVPAKSDRGSRHNWPKR
NT seq 2397 nt   +upstreamnt  +downstreamnt
atggctgcctcctcgagtagtgctgccaccgttaaaccgagtgaccattcttcaccagct
gaagaaacagagcaggaaacggagttttgtcggggatttaaggatgccgaggcgtttgtc
aagcacggtctgggagcggtggtgtccgtccctgccttccagcagttctgcgcctcacag
ggagaccggctcttacactgtatgagccagataatgcagcaccatggctgtcgatctcac
atgagcgacaggaacagactgaccgggctggaggacaggtttgacctggtggtggactca
aacgatgccatccttgagaaagtgggcattctgctggacgaggcgtctggtgtgagccgc
tcccagcagccggtgatgcctgcaggatatcagccgccaaagatcgtcgtgtccagctgg
aatcgcaggggaggagagcgcagggaggagacctttcaccttctacatgctaaaaacatt
cagcggccacagctaatcatcctgtttgttttccaggaactgatgtataaacctcttgcc
gagtccacttgtcagttcatcaacactttagatgacctcgttgctttgaatgagaagtta
gccaaggtgtctgagttcgctgtggacctggagcatcattcctacagaagctttctggga
atcacctgtctgatgcagatatcaacacgagaggaggatttcatcatagacacgctggag
ctgcgcagtgaaatgtacatcttaaacgagacgttcactgaccctgccatcgtgaaggtg
tttcacggtgccgactctgacatcgagtggctacaaaaggactttggtctttatgtggtc
aacatgttcgacacccatcatgctgcacgttgcctaaacctcggccgaaactccctcgac
catctcctgaaagtctactgcagtgtgaactctgataaacgctaccagctggcagactgg
aggatacgaccgttgctggatgagatgttgaagtacgctcaggctgacactcactatctg
ctgtacgtgtacgatcgagtccgagctgacctgtttgagaccagcaacagccagcccacc
ctcattcagcaggtctgggctaagagcagagacctctcgctcaagaaatacgtgaagcct
atttttacggaggactcgtacatggagctgtaccgcaagcagaagaggagcttcaacacg
cagcagctggcggcattcagactgctgtacacctggagagacacactgggacgggaggaa
gacgagagcactggatatatcttaccaaaccacatgatgatgaagatcgctgaggagctt
ccaaaggagcctcagggcatcatggcgtgctgtaaccccactccaccactagtgcgccag
cagatcaacgagcttcatcagctcatcaaacaggctcgagagactcctttactcaaggca
gaggtacttgctgaaaagaggaaatcaatgactcctaaaagaaagccacagcccacttca
ttcggaccgcatgacacctcccgctcgtctgaaagtgatttcctggacctttcctccttt
gaaactccgaccaaaccaggagttttattttcagaggaggatgaaagtgtgaaccaagag
gagcgatccttgcacggcctgatagcttcagctaaaatcagcatctttgtggaggaggag
gaggaggaggcggcatctcctgctcatctgagtgtggcacaacaaaaagctcacagcatc
atggagtcctttgagaaccccttcagaatgtatttgccatcaaaggacattcatatatcc
acgaatgccaaatatgacccctcttcaaagatttatgagatccgaaaccgctggaaatta
cagagtattgcgcagcagcagcaggaggcgcaggagaaacggcaagctaaagaacaggcc
aagaaagctcaagaggaacgaaagaaagccaaactgagctaccaggagtcactgcaaaat
gttcacactgtccggcagcaagtaatggaagcaaagcaagctggacagaaaagagagagc
gctgccagtgatgttggtgaagagagtcttaaaccaaacgttcaagtctcaaagactgaa
agtgagacatcggtggctgatcagtcgacaaaacctgctcagaaaaagaagaatgttcaa
gagcctgaagttcccaaacaaaacttcaaaccttttgactacagcaagtcaaattttaaa
atattcgctggtaaatcaaaagagagttcacagtttgatccaaacagacaagcacatgga
cccaagcagaagaaaaaccaaaaaggacagaagaaaagtgctgtggggggcaggagcatg
tcttatgtacctgccaaatctgaccgagggtctcgccacaattggcccaagagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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