KEGG   Corynebacterium crudilactis: ccrud_02550
Entry
ccrud_02550       CDS       T04829                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ccjz  Corynebacterium crudilactis
Pathway
ccjz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ccjz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ccrud_02550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccjz03021]
    ccrud_02550
   03400 DNA repair and recombination proteins [BR:ccjz03400]
    ccrud_02550
Enzymes [BR:ccjz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ccrud_02550
Transcription machinery [BR:ccjz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ccrud_02550
DNA repair and recombination proteins [BR:ccjz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ccrud_02550
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 DUF6568
Other DBs
NCBI-ProteinID: ANE03196
UniProt: A0A172QR79
Position
535315..538812
AA seq 1165 aa
MLEGPILAVSRQTKSVVDIPGAPQRYSFAKVSAPIEVPGLLDLQLDSYSWLIGTPEWRAR
QKEEFGEGARVTSGLENILEELSPIQDYSGNMSLSLSEPRFEDVKNTIDEAKEKDINYAA
PLYVTAEFVNNTTGEIKSQTVFIGDFPMMTNKGTFIINGTERVVVSQLVRSPGVYFDQTI
DKSTERPLHAVKVIPSRGAWLEFDVDKRDSVGVRIDRKRRQPVTVLLKALGWTTEQITER
FGFSEIMMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNSFFRAKRYDLARV
GRYKINRKLGLGGDHDGLMTLTEEDIATTIEYLVRLHAGERVMTSPNNEEIPVETDDIDH
FGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFG
TSQLSQFMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLASYARVNPFGFIETPYRRIIDGKLTDEISYLTADEEDRFVVAQANTHYDEDG
VITDETVTVRLKDGDIAMVSRTAVDYMDVSPRQMVSVGTAMIPFLEHDDANRALMGANMQ
KQAVPLVRAEAPFVGTGMEQRAAYDAGDLVITPVAGVVENVSADFITIMADDGKRETYLL
RKFQRTNQGTSYNQKPLVNLGERVEAGQVLADGPGTFNGEMSLGRNLLVAFMPWEGHNYE
DAIILNQNIVEQDILTSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVLKDLDDRGIVRI
GADVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRH
FSREDDDDLAPGVNEMIRIYVAQKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFLPDGTP
VDIILNTHGVPRRMNIGQVLETHLGWLASAGWSVDPEDPKNAELVDILPKDLLEVPAGSL
TSTPVFDGASNEELLGLLANSRPNRDGDVMVNEDGKAMLIDGRSGEPYPYPVSIGYMYML
KLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTI
KSDDVVGRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELAGDD
DEFDQAGASLGINLSRNERSDADTA
NT seq 3498 nt   +upstreamnt  +downstreamnt
gtgctggaaggacccatcttggcagtctcccgccagaccaagtcagtcgtcgatattccc
ggtgcaccgcagcgttattctttcgcgaaggtgtccgcacccattgaggtgcccgggcta
ctagatcttcaattggattcctactcctggttgattggtacgcctgagtggcgtgctcgt
cagaaggaagaattcggtgagggagcccgcgtaaccagcggccttgagaacattctcgag
gagctctccccaatccaggattactctggaaacatgtccctgagcctttcggagccacgc
ttcgaagacgttaagaacaccattgacgaggctaaagagaaggacatcaactacgcggca
ccactgtatgtgactgcggagttcgtaaataacaccaccggtgaaatcaagtcccagact
gttttcatcggcgatttcccaatgatgacgaacaagggaacgttcatcatcaacggaact
gagcgtgttgtggtcagccagctcgtccgctccccgggcgtctactttgaccagaccatc
gataagtccaccgagcgtccattgcacgcagtgaaggttattccttctcgcggtgcatgg
ctcgagttcgacgtcgataagcgcgattcggtcggtgttcgtattgaccgcaagcgtcgt
cagccagtcaccgtactgctgaaggctcttggctggaccactgagcagatcaccgagcgt
ttcggtttctctgaaatcatgatgtccaccctcgagtccgatggtgttgcaaacaccgat
gaggctttgctggagatctaccgcaagcagcgtccaggcgagcagcctacccgcgatctt
gcgcagtctctcctggacaacagcttcttccgtgcgaagcgctatgacctggctcgcgtt
ggtcgttacaagatcaaccgcaagctcggccttggtggcgaccacgatggtttgatgact
cttaccgaagaggacatcgcaaccaccatcgaatacctggtacgtctgcacgcaggtgag
cgcgtcatgacctctccaaacaatgaagagatcccagtcgagaccgatgacattgaccac
tttggtaaccgtcgtcttcgcactgttggcgaactgatccagaaccaggttcgtgttggt
ctttcccgcatggagcgagttgttcgtgaacgtatgaccactcaggatgcggagtctatt
actcctacctccctgatcaacgttcgtcctgtctctgcagctatccgtgagttcttcgga
acttcccagctgtctcagtttatggaccagaacaactctctgtctggtttgactcataag
cgtcgtttgtcggctcttggcccgggtggtctgtcccgtgagcgcgctggcatcgaggtt
cgagacgttcacccatctcactacggacgtatgtgcccaattgagactcccgaaggtcca
aacattggcctgatcggttccttggcttcttatgctcgagtgaacccattcggtttcatc
gaaactccttaccgtcgcatcatcgatggcaagctgaccgatgagatcagctacctcacc
gctgatgaagaagatcgcttcgttgttgcgcaggcaaatacgcactatgacgaagacggt
gtcatcactgatgagactgtcactgttcgtctgaaggacggcgatatcgccatggttagc
cgcaccgcggttgactacatggacgtttcccctcgtcagatggtttctgttggtaccgcg
atgattccattcctggagcacgacgatgctaaccgtgcactgatgggtgcgaacatgcag
aagcaggctgtgccactggtacgtgccgaggctcctttcgtgggcaccggtatggaacag
cgcgctgcatatgatgctggcgacctggtaatcactccagttgcaggtgttgtagaaaac
gtttccgctgatttcatcaccatcatggctgatgacggcaagcgcgagacctacttgctg
cgtaagttccagcgcaccaaccagggcaccagctacaaccagaagcctttggttaacttg
ggcgagcgcgttgaagctggccaggttcttgctgatggtccaggtaccttcaatggtgaa
atgtcccttggtcgtaaccttctggttgcgttcatgccttgggaaggccacaactacgag
gatgcgatcatcctcaaccagaacatcgttgagcaagacatcttgacctcgattcacatc
gaggagcacgagatcgatgcccgcgacaccaagcttggtgccgaggaaatcacccgcgac
atccctaacgtgtctgaagaagtccttaaggacctcgatgaccgcggtattgttcgcatc
ggtgctgacgttcgtgacggcgatattctggtcggtaaggtcacccctaagggcgagacc
gagctcaccccagaagagcgcttgctgcgcgctatcttcggtgaaaaggctcgcgaagtt
cgcgatacctccatgaaggtgcctcacggcgagaccggcaaggtcatcggtgtgcgccac
ttctcccgcgaggacgacgacgatctggctcctggcgtcaacgagatgatccgtatctac
gttgctcagaagcgtaagatccaggacggcgataagctcgctggccgtcacggtaacaag
ggcgttgttggcaagattcttcctcaggaagatatgccattccttccggacggcactcca
gtggacatcatcttgaacacccacggtgttccacgtcgtatgaacattggtcaggtcttg
gagactcacctcggttggctagcatctgctggttggtccgtggacccagaggatccaaag
aacgctgaactggtcgatatcctgcctaaggaccttcttgaggttcctgctggatctttg
acctccaccccagtgttcgacggtgcttctaacgaagagctcctcggcttgctcgctaac
tctcgtccaaaccgcgacggcgacgtcatggttaacgaagacggcaaggcaatgcttatc
gacggacgttctggtgagccttacccgtacccagtttccattggttacatgtacatgctg
aagctgcaccaccttgttgacgagaagatccacgctcgttccactggtccttactccatg
attactcagcagccactgggcggtaaagctcagttcggtggacagcgattcggcgaaatg
gaggtgtgggcaatgcaggcatacggcgctgcgtacacactccaggagctgttgaccatc
aagtctgatgacgtggttggccgtgtcaaggtttatgaagcaattgttaagggcgagaac
atcccggatccaggtattcctgagtccttcaaggttctcctcaaggagctccagtccttg
tgcctgaacgtggaggttctctccgcagacggtactccaatggagctcgcgggcgacgac
gacgagttcgaccaggctggtgcctcactgggcatcaacctgtctcgcaacgagcgttcc
gacgctgacaccgcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system