KEGG   Corynebacterium crudilactis: ccrud_02555
Entry
ccrud_02555       CDS       T04829                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
ccjz  Corynebacterium crudilactis
Pathway
ccjz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ccjz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ccrud_02555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccjz03021]
    ccrud_02555
   03400 DNA repair and recombination proteins [BR:ccjz03400]
    ccrud_02555
Enzymes [BR:ccjz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ccrud_02555
Transcription machinery [BR:ccjz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ccrud_02555
DNA repair and recombination proteins [BR:ccjz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ccrud_02555
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DUF496
Other DBs
NCBI-ProteinID: ANE03197
UniProt: A0A172QR72
Position
538896..542897
AA seq 1333 aa
MLDVNVFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLDLIIYFGANIITSVDDEARHSDQTTLEAEMLLEKKDVEADAESDIADRAEKLEED
LAELEAAGAKADARRKVQAAADKEMQHIRERAQREIDRLDEVWQTFIKLAPKQMIRDEKL
YDELIDRYEDYFTGGMGAESIEALIHNFDLDAEAEELRDIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLNAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLRLHECGLPKLMALELFKPFVMKRLVENEYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTLEKSAEEFGGQ
GAYAPADENGPEKGIYSSLAEAIMAYDRGVLGLQAIVRIRLNHLRPPAEVEAAQFPDGWN
QGETWLAHTSLGRVMFNEILPWNYPYLEGVMVRKGGGSDKIMLGDVVNDLAAKYPMITVA
QTMDKMKDAGFYWSTRSGVTIAMSDVLVLPNKEEMLDRYEESARQIEVKYNRGKLTGRER
YDRLVELWKDATDEVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGD
YITRPIKTSFREGLTVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRVED
CGTRQGVRVPVAAEILDATGAVTGYTGHDLIETSVSGRVLAGDATNAAGEVLLTAGTDLT
ELNIELLVEAGVKDVKVRSVLTCQTPTGVCAKCYGKSMASGQQVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNCAPIASVEGVIHLEDEGNFYTLT
IVPDDGSDNVVYEKLSKRQGLASTRVAMESNAGAFIERTLTEGDRVTVGQRLLRGAADPH
DVLEILGRRGVEQHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGS
LVDLSEAKLANSEAIGAGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGISRYRNISIKPTEAARNAAYSIPTYGESIYGDDGFG
EFTGASVPLDEAF
NT seq 4002 nt   +upstreamnt  +downstreamnt
gtgctcgacgtaaacgtcttcgatgagctccgcatcggcctggccactgctgacgacatt
cgtcgttggtcaaagggcgaggttaagaagccggagaccatcaactaccgaaccctcaag
cctgagaaggacggtctgttctgcgagcgtattttcggtccaactcgcgactgggagtgc
gcctgcggtaagtacaagcgtgtccgctacaagggcatcatctgtgaacgctgtggcgtt
gaggtcaccaagtccaaggtgcgtcgtgagcgcatgggacacattgaactcgctgcacca
gtaacccacatttggtacttcaagggtgttccatcccgtctgggttaccttttggacctt
gctccaaaagacctcgacctcatcatctacttcggtgcaaacatcatcaccagtgttgat
gacgaagctcgccacagcgaccagacaactctcgaggcagaaatgcttctggagaagaag
gacgttgaggcagatgcagagtctgatatcgctgatcgtgctgagaagctcgaagaggat
ctcgctgaactcgaagcagctggcgctaaggccgatgctcgccgcaaggttcaggctgca
gccgataaggaaatgcagcacatccgtgagcgtgcacagcgcgaaatcgatcgtctagat
gaggtctggcagaccttcatcaagcttgctccaaagcagatgatccgcgatgagaagctc
tacgatgaactgatcgaccgctacgaggattacttcactggtggtatgggtgcagagtcc
atcgaggctttgatccacaacttcgacctcgatgcagaggctgaagaactgcgcgacatc
atcaacaatggcaagggccagaagaagatgcgtgcgctgaagcgcctgaaggttgttgca
gccttccagcgttccggcaacgatccagccggcatggttctgaatgcgatcccagtgatc
ccaccagagcttcgcccaatggttcagcttgacggtggacgcttcgcgacctccgacttg
aacgacctctaccgtcgtgtaatcaaccgcaacaaccgcctcaagcgcatgattgaactc
ggtgcacctgagatcatcgtgaacaacgaaaagcgcatgctgcaggaatctgtagatgca
ctgttcgataacggtcgtcgcggtcgcccagttaccggaccgggtaaccgtccgctgaag
tctctctccgacttgctcaagggcaagcagggtcgtttccgtcagaaccttctgggtaag
cgtgttgactattctggtcgttccgtaattatcgttggtcctcagctgcgcctccacgaa
tgtggtctgcctaagctgatggctctcgagctcttcaagcctttcgttatgaagcgcctt
gtggagaacgagtacgcacagaacatcaagtctgcaaagcgcatggttgagcgccagcgc
cctgaggtgtgggacgtcctcgaagaggccatctctgagcacccagtgatgctgaaccgt
gcaccaaccctgcaccgcttgggcattcaggctttcgagcctgtccttgttgaaggtaag
gctattcagctgcacccactggcttgtgaagctttcaacgccgacttcgatggtgaccag
atggcagttcacctgccactgtccgctgaagctcaggctgaagcccgcgtgctgatgctt
gcatccaacaacattttgtccccagcttcaggcaagccattggctatgccacgtctggac
atggttactggcctgtactacctaactctggagaagtctgcagaagagttcggcggacag
ggcgcttatgctcctgcggatgagaatggtcctgaaaagggcatttactcctccttggca
gaagcaatcatggcttatgaccgcggtgtacttggcctgcaggctatagtgcgcattcgc
ctcaaccaccttcgcccaccagcagaggtagaggcagcgcagttcccagacggatggaac
cagggtgaaacctggctcgcacacaccagcttgggccgcgttatgttcaacgagatcctg
ccttggaactacccataccttgagggcgtcatggtccgtaagggtggcggctccgacaag
atcatgcttggcgatgtggttaatgacctcgcagctaagtacccaatgatcactgtggct
cagaccatggacaagatgaaggacgctggcttctactggtcaacccgttccggcgtcacc
attgctatgtctgacgttctggttcttcctaacaaggaagaaatgctggaccgctacgag
gaatctgcacgccagatcgaagttaagtacaaccgcggtaagctcaccggtcgtgaacgc
tacgatcgtctggtcgaactgtggaaggacgcaaccgacgaggttggacaggctgtcgag
gatctgtacccagacgacaacccaattccaatgatcgtgaagtccggtgctgccggtaac
atgcgtcagatctggacccttgcaggcatgaagggcatggttgtgaactcgaagggtgat
tacatcacccgtccgattaagacttcattccgtgaaggcttgaccgttctcgagtacttc
aacaactcacacggttcccgtaagggacttgccgataccgcgcttcgtaccgctgactcc
ggctacctgacccgtcgtcttgtcgacgtcgctcaggacgtcatcgtccgcgtcgaggat
tgtggaacccgccagggtgttcgcgttcctgttgcagctgaaatcttggatgcaactggc
gctgtcaccggttacaccggccatgacctgatcgagacttctgtctctggtcgtgttctg
gctggcgatgcaaccaacgctgcaggagaagttcttctcaccgctggcaccgacctgacc
gagctcaacattgagcttctggttgaggctggcgtcaaggatgtcaaggtccgctccgta
cttacttgccagaccccaactggtgtttgtgctaagtgctacggcaagtccatggcttcc
ggacagcaggttgatatcggagaggctgtcggcattgttgctgcacagtccattggtgag
cctggtacccagctgaccatgcgtaccttccaccaaggtggtgtcggtggcgatattacc
ggcggtctgcctcgtgttcaggagcttttcgaagcacgtgttcctaagaactgtgctcca
atcgcttctgttgaaggcgttatccaccttgaggatgaaggcaacttctacactctgacc
atcgttcctgatgatggctcagacaacgttgtctacgagaagctgtccaagcgacagggt
cttgcatccactcgcgtggctatggagtccaacgctggtgcgttcatcgagcgcaccctg
accgaaggtgaccgcgtcaccgttggccagcgtctgctccgcggtgcagctgatccacat
gacgtgctcgagatcctcggccgccgtggtgtggaacagcacctcatcgatgaggtgcag
gctgtttaccgtgcacagggtgtggccatccacgataagcacatcgaaatcatcattcga
cagatgcttcgtcgcggaaccgtcattgagtccggttcaactgagttccttccaggttct
ttggttgacctctctgaggcgaagctggctaactccgaagctatcggtgcaggcggacag
cctgcagagttgcgctctgagatcatgggtatcaccaaggcctcgcttgcaactgagtct
tggctgtctgcagcgtccttccaggagaccactcgtgtcctgactgatgctgccatcaac
aagcgctccgataagctcatcggcctgaaggagaacgtgatcatcggtaagctgatccca
gctggtaccggtatctctcgttaccgcaacatctccatcaagccaactgaggctgcccgc
aacgctgcgtactcgatcccaacttatggtgagtcgatctacggtgacgatggattcggt
gaattcaccggcgcgtccgtcccactggatgaagcattctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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