KEGG   Acetivibrio clariflavus: Clocl_2758
Entry
Clocl_2758        CDS       T01661                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ccl  Acetivibrio clariflavus
Pathway
ccl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ccl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Clocl_2758
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccl03021]
    Clocl_2758
   03400 DNA repair and recombination proteins [BR:ccl03400]
    Clocl_2758
Enzymes [BR:ccl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Clocl_2758
Transcription machinery [BR:ccl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Clocl_2758
DNA repair and recombination proteins [BR:ccl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Clocl_2758
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AEV69311
UniProt: G8M302
Position
complement(3206915..3207148)
AA seq 77 aa
MKDNKSKQSMIEPGISSLLEKVDSRYTLVVATAKRARQLTDGAHKLTDCQSDKPVTVAIN
EIDENKITYIRTKSGIK
NT seq 234 nt   +upstreamnt  +downstreamnt
atgaaagacaataagagtaaacagtcaatgattgagcccggtatcagttcgttactcgaa
aaagtggatagcagatatactttggtggtagctacagctaaaagagcaagacagcttacc
gatggtgctcataagcttacagattgccaatctgataagccggtgactgttgcaattaat
gaaattgatgagaataagattacgtatataaggacaaagagcggaatcaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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