KEGG   Campylobacter concisus ATCC 33237: CCON33237_1388
Entry
CCON33237_1388    CDS       T04635                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ccoc  Campylobacter concisus ATCC 33237
Pathway
ccoc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ccoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CCON33237_1388 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccoc03021]
    CCON33237_1388 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ccoc03400]
    CCON33237_1388 (rpoZ)
Enzymes [BR:ccoc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CCON33237_1388 (rpoZ)
Transcription machinery [BR:ccoc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CCON33237_1388 (rpoZ)
DNA repair and recombination proteins [BR:ccoc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CCON33237_1388 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF3363
Other DBs
NCBI-ProteinID: ALF48042
UniProt: A0A0M3V2N9
Position
complement(1382100..1382315)
AA seq 71 aa
MRTEQITARALKQVGDDRYKLSLIVAKRAEALANGAVVLVETDTSKMKFADIALLEVAEG
KIGLEAIVEGK
NT seq 216 nt   +upstreamnt  +downstreamnt
atgagaacagaacaaataacagcaagagcgttaaaacaagttggtgatgatagatataaa
ctttcacttatcgtagcaaagcgtgcagaagcactagcaaatggagcagtagtgcttgta
gaaaccgatacttcaaagatgaaatttgctgacattgcgctacttgaagtagctgagggc
aaaataggcttagaggcaatagttgaaggaaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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