KEGG   Campylobacter coli FB1: VC76_02525
Entry
VC76_02525        CDS       T03870                                 
Symbol
rpoBC_2
Name
(GenBank) Bifunctional DNA-directed RNA polymerase subunit beta-beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
ccof  Campylobacter coli FB1
Pathway
ccof03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ccof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VC76_02525 (rpoBC_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccof03021]
    VC76_02525 (rpoBC_2)
   03400 DNA repair and recombination proteins [BR:ccof03400]
    VC76_02525 (rpoBC_2)
Enzymes [BR:ccof01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     VC76_02525 (rpoBC_2)
Transcription machinery [BR:ccof03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     VC76_02525 (rpoBC_2)
DNA repair and recombination proteins [BR:ccof03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      VC76_02525 (rpoBC_2)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Peptidase_M23
Other DBs
NCBI-ProteinID: AJW57929
UniProt: A0A633QU48
Position
480904..485454
AA seq 1516 aa
MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGVKMKDLERVLYYEAYIVENAGDAYYDNESTKKVEYCDVLNEEQYQNLMQR
YENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMAATNSEAKKKTIIKRLKVVENFLNS
NLNANTNNEDAVPNRPEWMMITNLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNTR
LKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRF
RQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLLAKLEEKGYATTVKQAK
KMIENKTNEVWECLEEVVKGHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFN
ADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKSVTVPSQDMVLGIYYLSLEKM
GAKGSHKICTGIDEVMMALESKCLDIHASIQTMVDGRKITTTAGRLIIKSILPDFVTENM
WNKVLKKKDIAALVDHVYKQGGLQTTASFLDKLKNLGFEYATKAGISISIADIIVPNDKQ
KAIDEAKKQVREIQNSYNLGLITSGERYNKIIDIWKTTNNTLSRDMMKLVEKDKEGFNSI
YMMADSGARGSAAQISQLAAMRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKG
LADTALKTANAGYLTRKLIDVAQNVKITVEDCGTHEGVEINEITADSSIIETLEERILGR
VIAEDVIDPITNSVLFTEGTLIDEEKARILGESGVKSVNIRTPITCKAKKGICAKCYGIN
LGEGKLVKPGEAVGIISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYN
LKTYKNKEGKDIVANRRNAAILLVEPKIKAPFKGIINIENIHEDVIVSIKDKKQEAKYIL
RKYDLAKPNELAGVSGSIDGKLYLPYQSGAEVEENESIVEMIKEGWNVPNRIPFASEILV
KDGDPVVQNIKAGEKGILKFYILKGDGLDRVRNIKKGDIVKEKGFFVVVADENDREAKRH
YIPRESRIEFNDSEEVNFDSIIASAPKQEKSVIAEWDAYNNTIIAEIDGVVSFEDIEAGY
SADEQIDEATGKRSLVINEYLPSGVRPTLIIAGKGDKAVRYQLEPKTVIFVHDGDKISQA
DILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERLIIQ
AEDGTSAEYLIDKSKHIQVREGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISEIQQ
VYRGQGVVISDKHIEVIVSQMLRQVKIINSGHTKFIEGDLVSRRKFREENERILRLGGEP
AIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRMIPV
GTGLYGEQNLKLKEQE
NT seq 4551 nt   +upstreamnt  +downstreamnt
atgagtaaatttaaagtaatagaaataaaagaagatgcaagacctagggattttgaagca
tttcaacttagacttgcaagtcctgaaaaaattaaatcttggtcttatggtgaagtaaaa
aagccagagactattaattatagaactttaaaaccagaaagagatgggcttttttgcgct
aaaatttttggacctattagagattatgaatgtctttgtggtaaatacaaaaaaatgcgc
tttaaaggcgttaagtgtgaaaaatgtggagttgaagttgcaaattcaaaagttcgtcgc
tctagaatggggcatattgaacttgtaaccccagtagctcatatttggtatgttaattct
cttccaagtcgtataggaacacttctaggtgttaaaatgaaggatcttgaacgcgtactt
tattatgaggcttatatcgtggaaaatgcaggagatgcgtattatgataatgaaagcacc
aaaaaagtagaatactgcgatgtattaaatgaagaacaatatcaaaatttgatgcagcgt
tatgaaaatagtggctttaaagcaagaatggggggcgaagtagtccgtgacttgctagca
aatttagatcttgtggcgcttttaaatcagcttaaagaagaaatggctgctacaaattca
gaagctaagaaaaaaaccattataaagcgtttaaaagttgtagaaaacttcttaaattca
aatttaaatgcaaatacaaataacgaagatgcagtaccaaatcgtcctgaatggatgatg
attacaaacttacctgtattgccacctgatttgcgtcctttggttgctttagatgggggt
aaatttgcagtttctgatgtaaatgatttataccgccgtgttattaacagaaatacacgt
cttaaaaaacttatggagcttgatgcgcctgaaattattatcagaaatgaaaaaagaatg
ctacaagaagctgtagatgcactttttgataatggtcgtcgtgctaatgcagttaaagga
gcaaacaaacgcccgttaaaatctttgagtgaaattatcaaaggtaaacaaggtcgtttt
agacaaaacttgctaggtaaaagggtggatttttcaggtcgtagcgttattgttgtagga
ccaaaacttagaatggatcaatgtggcttacctaaaaaaatggctttagaacttttcaag
ccacatttattggctaagcttgaagaaaaaggttatgccactacagtaaaacaagctaaa
aaaatgatagaaaacaaaactaatgaggtttgggaatgtttagaagaggtggtaaaaggg
catcctgttatgttaaaccgtgctccaactctacataaactttctatccaagctttccat
cctgttttagttgaggggaaggcaatacaactccatcctttagtttgtgcagcatttaac
gcggattttgatggtgaccaaatggcggtgcatgtgccactttctcaagaagcgatcgca
gaatgtaaggttttaatgctttcttctatgaatattcttttgcctgcaagtggaaagtct
gtaactgtaccttctcaagatatggttttaggaatttattatctttctttggaaaaaatg
ggtgcaaaaggttcacataagatatgcacaggcattgatgaagtaatgatggcccttgaa
agtaaatgccttgatattcatgctagcattcaaactatggttgatggtagaaagattact
acaacagcaggaagacttattattaaatctattttacctgattttgttactgagaatatg
tggaataaggttttaaaaaagaaagatattgctgcacttgtggatcatgtatataaacaa
ggtggtttacaaactactgcaagctttttagataaacttaaaaatttaggttttgaatat
gcgactaaggcaggtatttctatatctatcgctgatattatcgttcctaatgataaacaa
aaggctattgacgaggctaaaaagcaagtaagagaaattcaaaattcttataatcttggt
ttgatcacttcaggtgaaagatataacaaaattattgatatttggaaaaccactaacaat
actctttcaagagatatgatgaagcttgttgaaaaagataaggaaggctttaattctatc
tatatgatggcagattcaggtgctagaggtagtgcagctcaaatttctcagcttgctgct
atgagaggacttatgactaagcctgatggatcgattatcgaaacgcctattatttcaaat
ttccgtgaaggtttgaatgttcttgagtattttatttcaactcacggagctagaaaaggt
ttagcagatactgctcttaaaacagcaaatgcaggttatttgacaagaaaacttattgat
gtggcgcaaaatgtaaaaattaccgttgaagattgtggcacacacgaaggtgttgaaatc
aatgagatcactgcagatagttccattatagaaactttagaagagagaattttaggcagg
gttatagctgaagatgtaatcgatcctattacaaattctgtactttttacagaaggtacc
ttaatagatgaagaaaaagctagaatattaggagaaagcggtgtaaaaagtgtaaatatt
cgcactccaatcacttgtaaagctaaaaaaggaatttgtgcaaaatgttatggaatcaat
cttggcgaaggcaagcttgttaagccaggtgaggcagtgggtattatctctgctcaatct
atcggtgagccaggaactcagcttacgcttagaaccttccacagcgggggaactgcaagt
acagatttacaagatagacaggtaagcgcccaaaaagaaggttttataagattttataat
cttaaaacttataaaaataaagagggaaaagacatagtggctaatcgtagaaatgcggct
attttacttgtagagccaaaaattaaagcaccatttaagggtattatcaatatagaaaat
atccacgaagatgtaattgtttctataaaagataaaaaacaagaggcaaaatatattctt
agaaaatacgatcttgctaaaccaaatgaattagcgggcgttagcggaagcattgatgga
aagctttatttaccgtatcaaagcggtgctgaagttgaagaaaatgaaagtattgttgag
atgattaaagagggttggaatgtgccaaaccgtattccatttgcaagtgaaattcttgta
aaagatggggatcctgttgtgcaaaatatcaaagcaggggaaaaaggaattttaaaattc
tatattcttaagggcgatggacttgatagggttagaaatattaaaaaaggcgatatagta
aaagaaaaaggattttttgttgtagttgctgatgaaaatgatagagaggcaaaaagacat
tacatcccaagagaatcaagaatagaatttaatgatagcgaagaggttaattttgattct
ataatcgctagtgcgccaaaacaagaaaagtcagttattgcagaatgggatgcttataat
aatactatcattgcagagattgatggtgtggtaagttttgaagatatagaagcaggttat
agtgcagatgagcaaatcgatgaggcaacaggcaagcgctcgctagtgatcaatgagtat
ttaccaagcggagtaagaccgactttgataattgcaggtaaaggtgataaagcagtgcgt
tatcagttggagccaaaaacggttatttttgttcatgatggtgataaaatttctcaagca
gatattttggcaaaaactccaaaagcagcagcgaaatcaaaagacattaccggaggtctt
ccaagggtttcagagctttttgaagcaagaaaaccaaaaaatgcagcagtaattgcagag
attgacggtgtggttcgttttgataagcctttacgctcaaaagaaagattgattatccaa
gcagaagatggcacaagcgcagaatatttgatcgataaatcaaaacatattcaagtaaga
gaaggtgaatttattcacgcaggtgaaaagctaactgatggagtagtttcaagtcacgat
gtgcttaaaattttaggcgaaaaagccttgcattattacttgatttctgaaattcaacaa
gtataccgaggtcaaggggttgttatttctgataagcatattgaggttatagtttctcaa
atgttaagacaggttaaaattattaatagtggacatactaaatttatcgaaggggatttg
gtttcaagacgcaaattccgcgaagaaaatgagcgaattcttagattgggcggagaacca
gctattgccgaacctgtacttttaggtgttacaagagcagcgataggcagtgatagtgtg
atttctgcagcttcattccaagaaacaacaaaagtacttaccgaagcaagtatcgcgggt
aaatttgactacttagaagacttaaaagaaaatgttattttaggtagaatgattcctgtt
ggaacagggctttatggtgagcaaaatttaaaacttaaagaacaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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