KEGG   Campylobacter coli FB1: VC76_03475
Entry
VC76_03475        CDS       T03870                                 
Symbol
rluD_3
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
ccof  Campylobacter coli FB1
Brite
KEGG Orthology (KO) [BR:ccof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccof03009]
    VC76_03475 (rluD_3)
Enzymes [BR:ccof01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     VC76_03475 (rluD_3)
Ribosome biogenesis [BR:ccof03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VC76_03475 (rluD_3)
SSDB
Motif
Pfam: PseudoU_synth_2 CHRDL_1_2_C COMPASS-Shg1 DUF6246
Other DBs
NCBI-ProteinID: AJW58117
UniProt: A0A0Q2VUF9
Position
678700..679452
AA seq 250 aa
MQEKAYKLLALQENISNREAKDLIDKGCVFSHGKKVVVARALMSDKTKFSIVKTSKPKVI
FEDENIIAINKPYAYISEELEKKFNAKLLNRLDKETSGVILLCKNEDFRKICIEEFKKQR
VYKSYIAVLDGILAEEIEIDEPILTIKTKNGALSKISKEGLSAVSIFTPIMMQAKKTLAK
IIIKTGRTHQIRVHAKFIKHGIIGDEKYAKISSDRMYLHSHEIRILNYQFKAELDSSFSK
LGFEIKNLDF
NT seq 753 nt   +upstreamnt  +downstreamnt
atgcaagaaaaagcatataaacttttagctttgcaagaaaatatttcaaaccgcgaagca
aaagatttgatagataagggttgcgttttttctcatggtaaaaaggtagttgtagcaaga
gctttgatgagtgataagacgaaatttagcattgtaaaaactagcaagcctaaagtaatt
tttgaagatgaaaatatcatagccataaataaaccctatgcttatatcagtgaagaactt
gaaaaaaaattcaatgcaaagttacttaaccgtcttgataaagaaactagtggtgttata
ctgctttgtaaaaatgaagattttcgaaaaatatgcattgaagagtttaaaaaacaaaga
gtttataaaagctatatagctgttttggatggaattttagcagaagaaattgagattgat
gagcctatattaaccataaaaactaagaatggagctttgagcaaaatttctaaagagggt
ttaagcgcggtcagtatttttactcctattatgatgcaagctaaaaaaactttggctaaa
attatcattaaaacaggcagaacccatcaaataagagtgcatgctaaatttatcaagcat
ggaattataggagatgaaaaatatgctaaaatttcaagtgataggatgtatttgcatagt
catgaaattcgaattttaaattatcaatttaaggcagaattagattctagcttttcaaag
cttggttttgagataaaaaatttagatttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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