KEGG   Campylobacter coli RM5611: YSU_06585
Entry
YSU_06585         CDS       T03167                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
ccoi  Campylobacter coli RM5611
Brite
KEGG Orthology (KO) [BR:ccoi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccoi03016]
    YSU_06585
Enzymes [BR:ccoi01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     YSU_06585
Transfer RNA biogenesis [BR:ccoi03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    YSU_06585
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2
Other DBs
NCBI-ProteinID: AHK75511
Position
1295656..1296957
AA seq 433 aa
MSSKKLFIQTLGCAMNVRDSEHMIAELTQKDNYTLTEDIKEADLILINTCSVREKPVHKL
FSEVGGFEKVKKSGAKIGVCGCTASHLGSEIFRRAPYVDFVLGARNISKITQAVNTPKFM
SVDIDYDESEFAFGDFRNSIYKSYINISIGCDKHCTYCIVPHTRGDEISIPLNIIYKEAQ
KAVDKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLEELSTIEGLERIRFTSPHPLHMD
DKFLEVFAKNPKVCKSMHMPLQSGSSQILKAMKRGYTKEWYLDRALKLRELCPNVSISTD
IIVAFPGESDKDFEETMEVLEKVRFEQMFSFKYSKRPLTKAATMPNQIDEEIASNRLSTL
QARHNEILDDIVKKQENKTFKVLFEELRAGNAIVGRTDNNFLVQVEGSEELLGTFKEVKI
TNAKRMVLYGEII
NT seq 1302 nt   +upstreamnt  +downstreamnt
ttgagctcgaaaaaactttttattcaaaccttaggctgtgcaatgaatgtcagagattct
gaacatatgatagcagaactgacgcaaaaagataattatactttaacagaagatattaaa
gaagcagatttgatacttatcaatacctgctctgtgcgtgaaaagcctgtgcataagctt
ttttcagaagtgggtggctttgaaaaggttaaaaaatcaggcgcaaaaataggagtttgt
ggatgtacagcttctcatttagggagtgaaatctttcgtcgtgctccttatgtggatttt
gtactaggagctaggaatatttctaaaattacccaagctgttaacactcctaaatttatg
agcgttgatatagattatgatgagagtgaattcgcttttggggattttagaaatagcatt
tataaatcatatattaatatctctataggttgtgataagcattgtacttattgtatagtt
ccccatacaaggggagatgaaatttccattcctttaaatatcatctataaagaagcacaa
aaagcagtagataaaggagctaaggaaattttcctattaggacaaaatgtcaataattat
ggtaaaagatttagaaatgaacacaaaaaaatggatttttcagatcttttagaagaactt
agcaccatagaaggattagagcgcatccgttttacaagtcctcatcctctacatatggac
gataaatttttagaagtatttgccaaaaatccaaaagtttgtaaatcaatgcatatgcct
ttgcaaagtggctcaagtcaaattttaaaagctatgaagcgtggttacaccaaagaatgg
tatctagatagggcattaaaattaagagaactttgcccaaatgttagcatatccacagat
attattgttgcatttccaggagaaagcgataaagactttgaagaaaccatggaagtttta
gaaaaagtacgctttgaacaaatgttttcttttaaatactctaaacgccctttaaccaaa
gctgctaccatgccaaatcaaatcgatgaagagatagcctcaaatcgacttagtactcta
caggctcgtcataatgaaattttagacgatattgttaaaaaacaagaaaataaaactttt
aaagttctttttgaagaattaagagcaggcaatgctatcgtgggtagaacagataataat
tttctagtgcaagttgaaggcagcgaagagctcttaggaacttttaaagaagtaaaaatt
actaatgcaaagcgtatggttttatatggggaaatcatttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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