KEGG   Campylobacter coli RM5611: YSU_08995
Entry
YSU_08995         CDS       T03167                                 
Name
(GenBank) hypothetical protein
  KO
K03204  type IV secretion system protein VirB9
Organism
ccoi  Campylobacter coli RM5611
Pathway
ccoi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ccoi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YSU_08995
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ccoi02044]
    YSU_08995
Secretion system [BR:ccoi02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   YSU_08995
SSDB
Motif
Pfam: CagX TraE Rho_RNA_bind
Other DBs
NCBI-ProteinID: AHK75973
Position
pRM5611_48kb:32627..33517
AA seq 296 aa
MKNITLAILSFLFLAPAFALNIPKTSSFDKRIAYAVYNANDVFQINAKNGYVSVLEFGID
ERIINTATGFAEGWDLIEKDNLLFIKPKAYKTQLVQQDNNMGESQVSQEFVLDPNPKDWK
TNLIVITNLNTYVFDLKLVNQNNNTTYKLSFSYPKKDLEATKEFLEAQEQEKIRTDLNKN
TIPRNWDFYMKVNKGSEDIAPNFAYDDGVFTYLGFDNTKTFPAVFMYDNGKESILNTHIK
KDGNYDVLVVQKIAKQILLRSGDKVVGIFNRGYAKNPLNKTRETSNENIQREINKK
NT seq 891 nt   +upstreamnt  +downstreamnt
atgaaaaatattactttagctatcctttcttttttatttttggctcctgcttttgcctta
aatatcccaaaaacttcttcttttgataaaagaattgcttatgcggtttataatgcaaat
gatgttttccaaatcaatgcaaaaaatggctatgtaagcgtattagaatttggcattgat
gaaaggattattaatactgccacaggttttgcagaaggttgggatttaatagaaaaagat
aatctcttattcattaagccaaaagcttataaaacacaacttgtgcaacaagataataat
atgggggaaagccaagtatcgcaagaatttgttttagatccgaatccaaaagattggaaa
acaaacttaattgttattacaaatctaaacacttatgtttttgatttaaaacttgtaaat
caaaataataacactacctataaacttagtttttcttatccaaaaaaagacttagaagca
actaaagaatttttagaagctcaagagcaagagaaaatacgcacagatttaaataaaaat
accatccctagaaattgggatttttatatgaaagttaataaaggaagtgaagacatagca
ccgaattttgcttatgatgatggtgtttttacatatcttggttttgataatactaaaact
tttcctgctgttttcatgtatgataatggtaaagaaagtattttaaatactcatattaaa
aaagatggcaattatgatgttttagtggttcaaaaaatcgcgaaacaaattctattaaga
agcggtgataaagtcgttggtattttcaatcgtggctatgcaaaaaatccattaaataaa
acaagagaaacctctaatgaaaatattcaaagagaaataaataaaaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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