KEGG T04060: AFK62

Cronobacter condimenti: AFK62_02280

Entry

AFK62_02280       CDS       T04060

Symbol

nusA

Name

(GenBank) transcription elongation factor NusA

K02600

transcription termination/antitermination protein NusA

Organism

ccon Cronobacter condimenti

Brite

KEGG Orthology (KO) [BR:ccon00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccon03021]
    AFK62_02280 (nusA)
   03009 Ribosome biogenesis [BR:ccon03009]
    AFK62_02280 (nusA)
Transcription machinery [BR:ccon03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     AFK62_02280 (nusA)
Ribosome biogenesis [BR:ccon03009]
Prokaryotic type
  rRNA transcription factors
   AFK62_02280 (nusA)

SSDB

Motif

Pfam:

NusA_N KH_5 HHH_5 S1 KH_2 KhpA-B_KH S1_2

Other DBs

NCBI-ProteinID:

ALB61401

UniProt:

K8A0F8

Position

481560..483047

AA seq 495 aa
MNKEILAVVEAVSNEKAVPREKIFEALESALATATKKKYEQEIDVRVSIDRKSGDFDTFR
RWVIVEEVTQPTREITLEAARFEDPSLNVGEYVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVDQFREHEGEIITGVVKKVNRENITLDLGSNAEAVILREDMLPRENFRPGDRIR
GVLYAVRPEARGAQLFVTRAKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE
DKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVEDLQAKHQAEAHAAIDTFT
KYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEIDGLDESTVEALRERAKNALTTLALA
QEESLGDNKPADDLLNLEGMDRSLAYKLAALGVCTLDDLADQGVDDLADIEGLTDEKAGE
LIMAARNIRWFSDEA

NT seq 1488 nt +upstreamnt +downstreamnt
atgaataaagaaattttggctgttgtcgaagcagtttccaacgaaaaagcggttccgcgc
gagaaaatctttgaagcgctggaaagcgcgctggctacggcaactaagaaaaaatatgaa
caagagatcgatgttcgcgtgagcatcgaccgtaaaagcggtgatttcgatacgttccgc
cgctgggttattgtcgaagaagtcacccagccgacccgtgaaatcacccttgaagcggca
cgtttcgaagatccgagcctgaacgttggcgaatacgttgaagatcagatcgaatccgta
acgtttgaccgcatcacgacgcagaccgccaaacaggtcatcgtacagaaagttcgtgaa
gcggaacgcgcaatggttgttgaccagttccgtgagcatgaaggtgagataatcactggc
gtggtgaaaaaagttaaccgcgaaaacattacgcttgacctcggcagtaatgctgaagcg
gtcattctgcgtgaagatatgttgccgcgtgaaaacttccgtccgggcgaccgcatacgc
ggcgtactgtatgccgtccgccctgaagcgcgcggtgctcagctgttcgtgacccgtgcc
aaaccggagatgctgattgagctgttccgcatcgaagtgccggaaattggcgaagaagtg
atcgaaattaaagctgccgctcgcgatccgggctcacgcgctaaaatcgcagtgaaaacc
aatgataagcgtatcgacccggtcggtgcttgtgttggtatgcgcggcgcgcgcgttcag
gccgtttcaactgagcttggcggcgagcgtatcgatatcgtattgtgggatgataatccg
gcgcagttcgttatcaacgctatggcgccggctgatgtcgcgtctattgtggtggatgaa
gataaacacaccatggatatcgccgtcgaagcgggcaatctggcacaggccatcggccgt
aatggtcagaacgtgcgtcttgcttcacagctgagtggctgggaactcaacgtcatgacc
gttgaagacctgcaggccaagcatcaggctgaagcgcacgccgctatcgatactttcact
aagtatctcgacattgatgaagagtttgccacggttctggtagaagaaggcttctcaacg
ctcgaagaactggcctacgtgccaatgaaagagctgctggaaatcgacggcctggatgag
tcgaccgtggaagcattacgtgaacgcgctaagaatgcgctcaccaccctggcgctggct
caggaagagagcctcggcgacaacaagcctgctgacgatctgcttaaccttgaaggtatg
gatcgttctctggcttacaagctcgctgctctcggtgtgtgtacgcttgatgacctcgcc
gatcaaggcgtggacgacctcgcggatatcgaagggttgaccgatgaaaaagccggtgag
cttatcatggccgctcgtaacatccgctggtttagcgatgaagcgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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