KEGG   Chondrus crispus (carragheen): CHC_T00004109001
Entry
CHC_T00004109001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CHC_T00004109001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccp03400]
    CHC_T00004109001
Enzymes [BR:ccp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     CHC_T00004109001
DNA repair and recombination proteins [BR:ccp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CHC_T00004109001
 Prokaryotic type
     CHC_T00004109001
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 17323122
NCBI-ProteinID: XP_005715406
UniProt: R7QAQ0
AA seq 298 aa
MQKSITSFFKKPSPAASISKTTKRASALSPKAAQELKLQTLAPDVKARIEANRAAARAKL
LARANSNATSKPAFGASLEPSWRKALSNTLNEPFWKSLAEFVAAERNAKTIFPPPEKVFS
AFNHSSFARTRVVIIGQDPYHGPRQAHGMCFSVQDGVRPPPSLINIFAELEKDIPGFTRP
RSGCLEKWANQGVLLLNSVLTVVSSEPNSHKGRGWERFTDAVVQALNHRKGPGIVFMLWG
GYAKKKGASINRKKHCVLTCVHPSPLSANRGGWFGNKHFSQANEFLTRTDQDVIDWKL
NT seq 897 nt   +upstreamnt  +downstreamnt
atgcagaagagcatcacctcctttttcaagaaaccgtcccccgctgcctccatctccaag
accaccaagcgcgcctcggccctctccccgaaggccgcccaagagctcaagcttcagacc
ctcgccccagacgtcaaggcccgcatcgaggccaaccgcgccgctgcccgcgcaaagctc
ctcgcccgtgccaacagtaacgccacatcaaaacccgcgtttggcgcctccctcgaaccg
tcctggaggaaggccttgtccaacacgctcaacgagcccttctggaagtcgctcgccgag
ttcgtcgctgcggaacgtaacgcgaaaaccattttcccaccgcctgaaaaagtcttttca
gccttcaatcattcctcttttgcaaggacgcgcgtcgtcatcatcggacaggacccttat
catgggcctaggcaggcccatggcatgtgtttctccgtccaggacggtgttcgcccgccc
ccgtctctcataaacatctttgcggagttagaaaaggatattcccgggtttactcgaccc
aggagcggctgtcttgagaagtgggcaaatcagggtgtgcttctgcttaattcggttctc
actgtcgtgtctagtgaacccaactcacataaaggaaggggctgggagcggtttaccgac
gccgttgtacaagcgctcaaccatcgaaaaggccctggtatcgtcttcatgctatggggt
ggatacgcgaagaagaagggcgcttctattaataggaagaagcattgcgtattgacttgt
gtacacccgagcccactttccgcaaacagaggtggatggtttggaaacaaacatttctct
caagcaaatgaattccttacccgcactgaccaggatgtcattgactggaagctgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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