KEGG   Chondrus crispus (carragheen): CHC_T00009482001
Entry
CHC_T00009482001  CDS       T02916                                 
Name
(RefSeq) GTP-binding protein yptV5
  KO
K07897  Ras-related protein Rab-7A
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp04144  Endocytosis
ccp04145  Phagosome
ccp04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CHC_T00009482001
   04145 Phagosome
    CHC_T00009482001
   04148 Efferocytosis
    CHC_T00009482001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccp04131]
    CHC_T00009482001
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccp04147]
    CHC_T00009482001
   04031 GTP-binding proteins [BR:ccp04031]
    CHC_T00009482001
Membrane trafficking [BR:ccp04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    CHC_T00009482001
Exosome [BR:ccp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CHC_T00009482001
  Exosomal proteins of other body fluids (saliva and urine)
   CHC_T00009482001
  Exosomal proteins of colorectal cancer cells
   CHC_T00009482001
  Exosomal proteins of bladder cancer cells
   CHC_T00009482001
GTP-binding proteins [BR:ccp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    CHC_T00009482001
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA AAA_16 PduV-EutP NTPase_1 RsgA_GTPase RNA_helicase AAA_24 AAA_22 nSTAND3 AAA_29 AAA cobW NACHT TniB AAA_23 ABC_tran
Other DBs
NCBI-GeneID: 17318856
NCBI-ProteinID: XP_005711137
UniProt: R7QSY4
AA seq 206 aa
MRTSRPRILKIVILGESGVGKTSLMDRYVCNEFSQQYKATIGADFYTKDVIIDDKPVGLQ
IWDTAGQERYQSLGSAFYRGADACVLVYDMTDARSFDALDSWRDEFLISAAPRDPDSFPF
VVMGNKVDVIDRARAVPTKKAQDWCYSKGTNVIPLFETSAMDDINVEAAFDAVARSGLRR
GEQDEDFIPRDTVEINRKPVDEQCAC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgaggacctcaagacccagaattctcaaaatcgtcatccttggtgagagcggggtggga
aagacatcgctcatggaccgttacgtgtgtaacgagtttagtcaacagtacaaggcgacg
ataggggcggacttttacaccaaggatgtaatcatagatgacaaacccgtgggcctgcag
atttgggatactgcgggtcaggagcggtaccaaagtcttggttccgctttttatcgagga
gcggatgcatgtgtgctagtgtacgacatgacagacgcgcggtctttcgatgcgcttgac
tcctggagagacgagtttctgatatcggcggctccgagggaccctgattctttcccgttc
gtcgtgatggggaacaaggtggatgtgatcgaccgagcgagagcggtaccgacgaagaag
gcacaagactggtgttattccaaagggacgaacgtgattcctctatttgagacgagcgcg
atggatgacattaacgtggaagcagctttcgacgcagtggctagatcaggattacgacgc
ggcgaacaagacgaggatttcattcctcgagatacagtggagattaacagaaaaccggta
gatgaacaatgcgcgtgctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (119)   
   KEGG ORTHOLOGY (1)   
   RefGene (115)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (151)   

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