KEGG   Corvus cornix (hooded crow): 104689531
Entry
104689531         CDS       T03546                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03013  Nucleocytoplasmic transport
ccw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104689531 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    104689531 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccw03019]
    104689531 (THOC3)
   03041 Spliceosome [BR:ccw03041]
    104689531 (THOC3)
Messenger RNA biogenesis [BR:ccw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104689531 (THOC3)
Spliceosome [BR:ccw03041]
 Complex C
  Other components
   EJC/TREX
    104689531 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104689531 (THOC3)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A RMC1_N NBCH_WD40 PD40 Coatomer_WDAD Peptidase_S9_N Nup160 Cytochrom_D1 YNCE PROPPIN DPPIV_N DUF359
Other DBs
NCBI-GeneID: 104689531
NCBI-ProteinID: XP_039415401
Position
13:3987930..3991388
AA seq 323 aa
MALSPYVQAMQELFRANTRSREFPAHGAKVHSVAWSCCGRRLASGSFDKTASVFLLEKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKPIQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAFACDD
KDGKYDSSREAGTVKLFGLPNDS
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcgctgtcgccctacgtgcaggccatgcaggagctgttccgcgccaacacgcggagc
cgcgagttcccggcgcacggtgccaaggtgcactcggtagcctggagctgctgcggccgc
cgcctcgcctccggctccttcgacaagaccgccagcgtcttcctgctcgagaaggaccgg
ctggtgaaggagaacaactaccggggtcacggggacagcgtggatcagctctgctggcac
cccagcaaccctgacctcttcgtcacagcgtcaggggacaaaaccatccgcatctgggac
gtccgcaccaccaagtgcatcgccactgttaacaccaaaggtgagaacatcaacatctgc
tggagccccgatggacagaccatcgccgtggggaacaaggatgacgtggtcaccttcatt
gatgccaagacacatcgctccaaagctgaggagcagtttaagtttgaagtgaacgagatc
tcctggaacaacgataacaacatgttcttcctcaccaatgggaacggctgcatcaacatc
ctcagctacccagagctgaaacccatccagtccatcaatgcacatccttccaactgcatc
tgcatcaagttcgatcccatgggaaaatattttgccacaggcagtgctgatgcgttggtc
agcctctgggatgtggatgagctggtgtgtgtgagatgcttctccaggcttgactggcct
gtgcggacgctgagctttagccatgatgggaagatgctggcctcagcatcagaagatcac
ttcattgacattgccgaggtggagacaggagagaagctctgggaggtgcagtgtgagtcc
cccaccttcacagtggcctggcacccgaagaggccgctgctggcctttgcctgtgacgac
aaagatggcaaatacgacagcagcagggaggctggcactgtcaagctcttcgggctcccc
aacgactcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (33)   

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