KEGG   Corallococcus coralloides: COCOR_03717
Entry
COCOR_03717       CDS       T01780                                 
Symbol
lpdA
Name
(GenBank) alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ccx  Corallococcus coralloides
Pathway
ccx00010  Glycolysis / Gluconeogenesis
ccx00020  Citrate cycle (TCA cycle)
ccx00260  Glycine, serine and threonine metabolism
ccx00280  Valine, leucine and isoleucine degradation
ccx00310  Lysine degradation
ccx00380  Tryptophan metabolism
ccx00620  Pyruvate metabolism
ccx00630  Glyoxylate and dicarboxylate metabolism
ccx00640  Propanoate metabolism
ccx00785  Lipoic acid metabolism
ccx01100  Metabolic pathways
ccx01110  Biosynthesis of secondary metabolites
ccx01120  Microbial metabolism in diverse environments
ccx01200  Carbon metabolism
ccx01210  2-Oxocarboxylic acid metabolism
ccx01240  Biosynthesis of cofactors
Module
ccx_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ccx_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ccx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ccx_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    COCOR_03717 (lpdA)
   00020 Citrate cycle (TCA cycle)
    COCOR_03717 (lpdA)
   00620 Pyruvate metabolism
    COCOR_03717 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    COCOR_03717 (lpdA)
   00640 Propanoate metabolism
    COCOR_03717 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    COCOR_03717 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    COCOR_03717 (lpdA)
   00310 Lysine degradation
    COCOR_03717 (lpdA)
   00380 Tryptophan metabolism
    COCOR_03717 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    COCOR_03717 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccx04147]
    COCOR_03717 (lpdA)
Enzymes [BR:ccx01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     COCOR_03717 (lpdA)
Exosome [BR:ccx04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   COCOR_03717 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored HI0933_like FAD_binding_2 GIDA Lys_Orn_oxgnase NAD_binding_8 FAD_binding_3 Thi4 3HCDH_N DAO Amino_oxidase
Other DBs
NCBI-ProteinID: AFE09247
UniProt: H8MPQ4
Position
4617421..4618818
AA seq 465 aa
MAETFDVVIIGSGPGGYVGAIRAAQLGLKTAIIEKDKRLGGTCLHRGCIPTKSLLWTASL
FHHIKESSDFGIDVANPTVNWANAQKHKDKVVTKGANGIDFLMKKNKITVVKGHGRIAGK
GKVEVTAEDGSKQTLETKNIIIATGSVPKSLPNVAVDHKRVMNSDSILTIDRIPKSIIVL
GAGAVGCEFASVFNHVGSKTAIVEYMPALLPIEDADISKELDKIFRRRGIDVHTGSAVQK
VEHTADGVRVTMKVGEETKTLEAEILLSAVGRAPVTEDVGLNKTSIQVDRGFIKVDTLCR
TSEPNVYAIGDVIPTPMLAHMASAECVMVVEHIAGKNPAPINYDLTPSATYCYPEVASVG
LTEKKAKERGYDVKVGIAPFGAVTKSAISNESVGLIKIVSDKKYDEVLGIHIIGPHATEL
LAEACVAMKLEITTEELAHTIHAHPTLSEIMHEGAEATLGHPLHF
NT seq 1398 nt   +upstreamnt  +downstreamnt
gtggctgagactttcgacgtggtgatcatcggctcgggtcctggcggctatgtgggcgcc
atccgcgcggcccagctcgggctgaagacggccatcatcgaaaaggacaagcgcctgggt
ggcacgtgtctgcaccgcggctgcatccccaccaagtcgctcctgtggacggcgtcgctc
ttccaccacatcaaggagtcgtccgacttcggcatcgacgtggcgaacccgaccgtgaac
tgggccaacgcccagaagcacaaggacaaggtcgtcacgaagggtgccaacggcatcgac
ttcctgatgaagaagaacaagatcaccgtggtgaagggccacggccgcattgccggcaag
ggcaaggtggaggtcacggcggaggacggctccaagcagaccctggagacgaagaacatc
atcatcgccacgggctcagtgcccaagtccctgccgaacgtggcggtggaccacaagcgg
gtgatgaacagtgactccatcctgaccatcgaccgcatccccaagagcatcatcgtcctg
ggcgcgggcgcggtgggctgcgagttcgcctccgtgttcaaccacgtgggcagcaagacg
gccatcgtggagtacatgcccgcgctgctccccatcgaggacgcggacatctccaaggag
ctggacaagatcttccgccgccgcggcatcgacgtgcacacgggctccgcggtgcagaag
gtggagcacacggcggacggcgtgcgcgtcaccatgaaggtgggcgaggagaccaagacg
ctggaggccgagatcctcctgtcggcggtgggccgcgcgcccgtcaccgaggacgtgggc
ctcaacaagacgtccatccaggtggaccgcggcttcatcaaggtcgacacgctgtgccgc
accagcgagcccaacgtctacgccattggcgacgtcatccccacgccgatgctggcgcac
atggcctccgccgagtgcgtgatggtggtggagcacatcgccgggaagaaccccgcgccc
atcaactacgacctgaccccgtccgccacgtactgctaccccgaggtggcgtccgtgggc
ctcacggagaagaaggccaaggagcgcggctacgacgtgaaggtgggcatcgcccccttc
ggcgccgtcaccaagtcggccatctccaacgagtcggtcggcctcatcaagatcgtctcc
gacaagaagtacgacgaggtgctgggcatccacatcatcgggccgcacgccacggagctg
ctcgccgaggcctgcgtcgcgatgaagctggagatcaccaccgaggagctggcccacacc
atccacgcgcacccgacgctctccgaaatcatgcacgagggcgccgaggccacgctgggt
cacccgctgcacttctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (89)   

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