KEGG   Chthonomonas calidirosea: CCALI_00401
Entry
CCALI_00401       CDS       T02699                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
ccz  Chthonomonas calidirosea
Brite
KEGG Orthology (KO) [BR:ccz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccz03009]
    CCALI_00401
Enzymes [BR:ccz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     CCALI_00401
Ribosome biogenesis [BR:ccz03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CCALI_00401
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF5479 Ub-Mut7C KRBA1
Other DBs
NCBI-ProteinID: CCW34236
UniProt: S0ESH2
Position
453435..454457
AA seq 340 aa
MEKRVYTILKEDVGERLDRFVARMVPQTSRSSVTRWIEQTSLGWGGVWVNGQASRPSYRL
REGDEVAVQIPPPQPITLLPEALPLTILYEDEDLLVVNKAQGMVVHPAPGSPHGTLVNAV
LAHTEKVSEVGEDERPGIVHRLDKDTSGLLVVAKTDYALRQLQLQLQARQMERRYLALVW
GAPRFNEAVIDAPIGRHPVDRKKMAVIEDTRHKAREARTELKVQKRFGSLFTLLEAKLHT
GRTHQIRVHCAYIHHPVVGDPVYGGDRNLPQTKLAFEVRKKLEELLDRLPGQALHAYFLA
FLHPVTGERLYFHTEPPEPMQALISALEEICVNGDETAPC
NT seq 1023 nt   +upstreamnt  +downstreamnt
ttggaaaagagggtgtacactatcctcaaagaggatgttggagaacgacttgataggttc
gttgcacggatggtccctcagacttctcgttcctcagttacccgctggattgaacagaca
tcgttaggctggggaggtgtttgggtaaatggccaggcatcgcgccctagctatcgttta
cgggaaggggatgaagttgctgttcaaattccaccacctcaacctatcacgctccttccg
gaggcgctacctttaacgatcctctatgaggatgaagacctacttgtcgtcaacaaagca
cagggaatggtggtgcatccagctcctggctctccacatggaacactcgttaacgcggta
ttagctcataccgagaaggtttcagaggttggtgaagacgagcgtcctggtatcgtacat
cgtcttgataaagatacaagtggtcttctcgtagttgcaaaaaccgattacgcccttcgc
caattacagttgcagttacaggcgaggcagatggaacgacggtatcttgcgctggtgtgg
ggagcgcctcgatttaatgaggctgttattgatgcgcccatagggcggcatcctgtagat
cgtaagaagatggctgtcattgaagacacacggcataaggcgcgggaggcaaggaccgag
ctaaaggttcaaaagcggttcggctctctatttaccctgctcgaagcgaagttgcacaca
ggaagaactcatcaaattcgcgttcactgtgcttacattcatcatcctgttgtgggagac
cctgtgtatgggggcgaccgaaacttgccgcagacgaaactcgccttcgaggtgcgcaag
aaactagaggagttgctggatagactgccaggtcaggctttgcacgcctatttcttagcg
tttcttcatccggttactggagagcggctgtattttcacaccgaaccacccgaacccatg
caagcgttgatctcggctctagaagagatatgtgtgaatggagacgagacggcaccatgc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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