KEGG   Clostridioides difficile CD196: CD196_2404
Entry
CD196_2404        CDS       T00997                                 
Name
(GenBank) putative transcriptional antiterminator
  KO
K03491  probable licABCH operon transcriptional regulator
Organism
cdc  Clostridioides difficile CD196
Brite
KEGG Orthology (KO) [BR:cdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cdc03000]
    CD196_2404
Transcription factors [BR:cdc03000]
 Prokaryotic type
  Other transcription factors
   BglG family
    CD196_2404
SSDB
Motif
Pfam: PTS_EIIA_2 PRD HTH_11 Mga HTH_DeoR HTH_Mga PuR_N PTS_IIB Phage_terminase CggR_N
Other DBs
NCBI-ProteinID: CBA64607
UniProt: A0A0H3N5P6
Position
complement(2792663..2794591)
AA seq 642 aa
MHKRLLTLFKLLNESDDKITCKTLSNHLKVSERTIRNDITSINGTLEKNGAIIKIKKGEG
YYIDILNLALYQQYLALISDDIMDSSEIPDSPIERNQYILKYILYNNTYIKLEDLANSLY
VSKFTILNDIKRIKPILSKYNLILVSKPYYGVKVEGKEIDIRRCISNNMINRNFENYIIG
ITDREIELFNNVDLIELQRVVLSEINKFNINFLDFNLKNFIIHLAITISRILDGYCLDNV
LDVVLTDFQSNTTVENIFNYIESKYTIIISKADRVYLYNHFITKSSLLDNVSNRVDTKII
EYVEEILEVINNQYTFDLRNDSVLFDDLVLHFKSILNSKSYNLNKVNPLINTIKSNYPLA
FEITLNAIEKVFKNSIYSLTEDEIGYVSLHIGAGIERFFQNNIKCKNVVLVCGSGYGSSR
LLEVQLNKVFHDKINILQCLSFNQFLASELSDVDIIISTIPLNHDSIPIVLVDLKLLKKD
IENISKSITNNSHIYSNLLDNFFDKNLFIVNPKIKDKDELIKLMCNKLTQSEIVFPSFAE
SVFYRESLSSTNIDDFLAIPHPMELSSIRTKICISILNEPIYWSEDSTVKLIMMLAINKD
DYIKINSIYDILLKIIHDNDIRDSISNCNDFDNFLSIIKSIV
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgcacaagagattgctcacgttgtttaaattattaaatgaaagtgatgataaaattact
tgtaaaactttaagtaatcatttaaaagtgagtgagagaactataagaaatgatattact
tctataaatggaactttagagaaaaatggtgctattattaaaataaaaaaaggagaagga
tattatatagatattcttaatttagcattataccaacagtatctagcattaatatctgat
gatattatggattcaagtgaaataccagattctcctatagaaagaaatcaatatatttta
aaatatattctctataacaatacatatataaaactagaagatttagctaatagcttgtat
gtgagtaaatttacaatactaaatgacataaaaagaataaagcctattttgtcaaagtat
aatttaatattagtttctaagccatattatggagttaaagttgaagggaaggaaatagat
attcgaagatgtatttctaataatatgataaataggaattttgaaaactatataattgga
attacagatagagaaatagaattatttaataatgtagatttaatagagcttcaaagggta
gtgttaagtgaaattaataaatttaatataaattttctagattttaatctaaaaaacttt
attatccatttagctattactataagtagaatacttgatggttactgcttagataatgtt
ttagatgttgttttaacagattttcaatcgaatacaactgttgaaaatatatttaattat
attgagagtaaatatactataattatttcaaaggcagacagagtttatctatataatcat
tttataactaaaagttctcttttggataacgtttccaatagggtggatactaaaattata
gagtatgttgaagaaattttagaagtaatcaacaatcaatatacttttgaccttagaaat
gatagtgtattatttgatgatttagtactgcactttaaatcaattctcaattctaaatct
tataatttaaataaggtgaatccccttataaatacaataaagagtaattatcctttagca
tttgaaataactttaaatgctatagaaaaagtttttaaaaatagtatttactctttaaca
gaagatgaaattggatatgtatccctgcatataggtgctggaatagagagattttttcaa
aataatattaagtgtaaaaacgtagtattagtatgtggttcagggtatggttcaagtagg
ttattagaggttcaattaaacaaagtttttcatgataaaataaatatacttcaatgtcta
tcatttaatcaatttttagctagtgaattgtcagatgtagatataataatatcgacaatt
cctttaaatcatgatagtattcctattgtattagtggatttaaaactattaaaaaaagat
atagagaatatatctaagtcaatcactaataattcccatatttatagtaatcttttggac
aatttctttgataaaaatttatttattgttaatcctaaaatcaaagataaagatgagctt
ataaagttgatgtgcaacaaattaactcaaagtgaaattgtatttccatcatttgctgaa
tctgtattttacagagaaagtttatcttctaccaatatagatgattttttagctatacct
catcctatggaattaagctctataagaactaagatttgtatttccatattgaatgaacca
atatattggagtgaagattctactgttaaattaatcatgatgttagctataaataaagat
gattatataaaaataaactccatttatgatatccttttaaagataattcatgacaatgat
attagagatagtatatctaattgtaatgattttgataattttctttccataatcaagtct
atagtatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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