KEGG   Corynebacterium diphtheriae CDCE 8392: CDCE8392_0668
Entry
CDCE8392_0668     CDS       T01700                                 
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cdd  Corynebacterium diphtheriae CDCE 8392
Pathway
cdd03420  Nucleotide excision repair
cdd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cdd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CDCE8392_0668
   03430 Mismatch repair
    CDCE8392_0668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdd03400]
    CDCE8392_0668
Enzymes [BR:cdd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CDCE8392_0668
DNA repair and recombination proteins [BR:cdd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CDCE8392_0668
   MMR (mismatch excision repair)
    Other MMR factors
     CDCE8392_0668
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: AEX71666
Position
669341..672571
AA seq 1076 aa
MLSPQELSHALGQKFPPTPQQADVIGSPLAPTLVVAGAGAGKTETMAARVVWLVASGLVD
PDRVLGLTFTRKAAQQLSKRIRDRLEQLAGIDNLRDLDPTGALATKLEAIAPTVSTYDSY
AGRLISEYGLLLPVEPSSRLISQTELFQIAHSIVSAHTGALNTSNSPNTVTSTLMSLVSE
MDNHMVSPTDIEEESAAFLAMIEDVEATSKRVPSKEVYKWRDTQVLRNELLPLVQQLKTH
LADNHLMTFGEQMSLAARLAAENPQVGASQRNRYQIIMLDEYQDTGHAQRVLLKSLFAGT
AVTAVGDPMQSIYGWRGATAANLERFLTDFGNNGAPATKKELTVSFRNPPEVLDLANRVS
RELLGVPEDPRRPVQPLEPGPAALNGIVRLGFFPSMDEERSYVADHLAQAYEQHDGDHPF
TAAVLVRKRKHSAAIALELQQRGVPVEIVGLAGLLGIPEVADLVAIATLLVRPYDTQAAM
RILAGPSVGLGMADLMALSDRAYNLSGRDRRATTELSRDPLERLKQIIADTTPSDQDSIV
GLAEAVADLDERLDSSDGPRYSAKGSERLRTLAARLRYLRTNSLSNSLPDLFADIERVFG
IRTEVLQREDPRSDGATGTAHLDRFAEVVQDFSRIPGANLSLLLDYLSLAESEENGLEPG
EVQVTADRVQILTVHKAKGLEWQHVAVLHADANTYVAKASTWLTNASAVPSALRGDAKGD
EDLVGAPVFEIDTPETAAELAKAGKAHIADFKQVAAEENARLFYVAITRAEQQVLVTASA
DPSKKRPVLPYEYLTMLRNDFPDSVEEWHERGEAEDYVPPAPQEAVFPPNYTVVGAEDVF
AAMQKQPDLISDDDLFERWEKEVSALIEEHEQLSAPVVAVDIGVELTATDIVNLAKNPEN
FAQRRRRPVPFKPNSYAKRGTAFHEWLENRFGVEALLDETELPGIGEELDDSDLDRLKEA
FLDSEWADRTPEHVEHPFEVSIGHHIVRGRMDAVFKNPDGRWIVVDWKTGQPPTDNHEKE
SVAMQLAVYRLAWARLQGIDVDRVDAAFHYVGRNVTYRPQQLPDGEELALTLDPSV
NT seq 3231 nt   +upstreamnt  +downstreamnt
atgctaagccctcaagaactctcgcacgcactgggacaaaaatttccaccaacgccgcaa
caagcagacgttattggctcaccccttgcccccacactcgtggtcgctggagcaggtgca
ggaaaaactgaaacgatggctgcccgagtagtgtggctcgtggctagtggactcgtcgac
cctgatcgtgttttagggctcaccttcacgcgtaaagcagcacagcagttatccaagcga
attcgtgatcggcttgaacaactagcaggcattgataacctgcgcgatctagatccgaca
ggcgcattggctacaaaactagaagcgatcgcccccacggtatctacctacgactcctac
gcaggacgcctgatcagcgaatacggtttgttgcttcctgtagaaccctcgtcgcgtctt
atctcccaaacagagctattccaaattgcgcattcgatagtgtctgctcacacgggtgca
ctcaatacctcgaattcacccaataccgtgacctccacgctgatgtctttggtttcggaa
atggacaaccacatggtgtcgcccacagacattgaagaagaatcagcggcatttcttgcc
atgatcgaagacgtcgaagcaacaagtaaacgggtaccaagcaaagaggtgtataaatgg
cgagacacacaggtgctgcgcaatgaactactgccactagttcaacagctaaaaacacat
ctagctgataaccacctcatgacctttggcgagcaaatgtctttagcagcccgcctcgct
gcagaaaatccacaggtgggagcgtcgcaacgcaataggtatcagatcatcatgcttgat
gaataccaagatactggccatgcgcagcgtgttttgctcaaaagcctatttgctggcacc
gcggtcaccgcagttggtgaccccatgcaatctatttacggatggcgtggtgccactgca
gccaacctcgaaaggttccttacagacttcggaaataacggtgctcccgccaccaaaaaa
gaactcaccgtgtcgtttagaaaccctcctgaggtcctcgacctagctaaccgagtatct
cgggaactgctgggcgtacccgaagatccgcgacgaccagtgcaacctctcgagccaggc
cctgcagcattaaacggcatagtgagattgggttttttcccatcgatggatgaagagcga
tcctatgttgctgatcatttagctcaagcatatgagcaacacgatggggatcatcccttt
actgcggctgtgcttgttcgcaaacgcaagcactcggcggcaattgctctggaattacaa
caacgcggcgtcccagtagaaattgttggactcgcaggactactcggtattccagaagtt
gcggatttagtagccattgccacattgttggtgcgtccttacgatactcaagccgctatg
cgtattttggcagggcccagcgtaggacttggtatggcggacctcatggctttgagcgat
cgcgcctacaacctcagtggccgagatcgacgtgccacaacggaattatcgcgtgacccc
ctcgaacgattaaaacagatcattgccgatacaactcccagtgaccaagattctatagtg
ggtcttgcagaagcagtggctgacctcgatgaacgcctcgacagcagcgatggtccacga
tatagcgccaaaggtagcgagcgactccgcacactagcggcacggctgcgctatctacgc
accaatagtttgagcaactctttaccggacctctttgccgatattgaacgagtattcggc
atacgcaccgaggtcctacaacgagaagatccccgtagcgatggtgcaaccggcaccgca
catctcgatcggttcgccgaggttgtccaagatttctctcgtattccaggcgccaacttg
agtttgctattggactacctttcactggcagaatccgaagaaaatgggttagaacctggc
gaagtacaagtgactgctgaccgagtacagatcctcaccgtgcataaagccaaaggccta
gaatggcagcatgttgccgtcttacacgccgatgccaacacctacgtagccaaagcgtcg
acatggctgacaaacgcttcagctgtgccttcagcacttcgcggagatgccaaaggcgac
gaggatcttgtaggcgcgcccgtttttgaaatcgacaccccagaaactgcagcggaacta
gcaaaagcaggaaaagcgcatattgctgattttaaacaagtggctgcggaagaaaacgca
cgtcttttttacgtcgcaattactcgagcagaacaacaagtacttgtcacagcttctgcc
gatccctcaaaaaaacgtccagtcctgccttacgaatacctcactatgctgcgcaacgat
ttccctgacagcgtagaagaatggcatgaacgtggtgaagcagaagactatgtgccacca
gcgcctcaagaagccgtattcccgccgaactacaccgttgtcggcgcagaagacgtgttc
gccgccatgcaaaagcaaccagatctgatcagcgacgacgatctgtttgaacgatgggaa
aaagaagtaagcgctctgatcgaagaacacgagcaactttccgcacccgtcgtcgcagtc
gatatcggagtagagcttacagccacagacattgtgaaccttgcaaagaaccccgagaac
tttgctcaacgcagacggcgtccagtgccatttaaaccaaactcatacgccaagcgcggt
acggcattccacgaatggctagaaaaccgctttggtgtagaagcattacttgatgaaact
gagctgccgggtatcggagaagaacttgatgactcggacctcgatagattgaaagaggcg
ttcctcgacagcgagtgggcagaccgaaccccagaacatgtagaacacccctttgaagta
tcaattgggcaccacatagttcgtgggcgcatggacgcagtgtttaaaaaccccgacgga
cgatggatcgttgtggattggaaaacgggacagcccccaacagacaatcacgaaaaagaa
tcagtggccatgcagctggcagtttatcgactcgcatgggcacgacttcaaggaattgat
gtggatcgagtcgacgcagcattccactatgtgggcagaaatgtgacataccggccacaa
caattgcctgatggggaagaacttgcattgacactagacccaagcgtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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