KEGG   Camelus dromedarius (Arabian camel): 105087814
Entry
105087814         CDS       T04642                                 
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
  KO
K13126  polyadenylate-binding protein
Organism
cdk  Camelus dromedarius (Arabian camel)
Pathway
cdk03015  mRNA surveillance pathway
cdk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105087814 (PABPC1L)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105087814 (PABPC1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdk03019]
    105087814 (PABPC1L)
   03041 Spliceosome [BR:cdk03041]
    105087814 (PABPC1L)
Messenger RNA biogenesis [BR:cdk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     105087814 (PABPC1L)
   mRNA cycle factors
    Stress granule specific factors
     105087814 (PABPC1L)
Spliceosome [BR:cdk03041]
 Complex C
  Other components
   Complex C specific factors
    105087814 (PABPC1L)
SSDB
Motif
Pfam: RRM_1 PABP RRM_5 RRM_7 RRM_occluded SET_assoc RRM_3
Other DBs
NCBI-GeneID: 105087814
NCBI-ProteinID: XP_031289606
Position
19:complement(13640753..13660705)
AA seq 617 aa
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDDHGSRGFGFVHFETYEAAQHAISTMNGMLLNDRKVFVGHFKSRRERE
AELGTRVMEFTNVYVKNLHVDVDERRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEK
HEEAQKAVMDMNGREVSGQLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKN
LDDSINDEKLRKEFSPYGVITSAKVMTEGDHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYIQRLSTLRALGGPLLGSFQQPANYFLPAVPQPPAQAPY
YGSGPPVQPAPRWMAQPPRPSSTYPPAASVVRPAAVSRRPSAHVGGARQVSTHVPRPVPH
TQGVANIGTQTTGPSAAGCSTPRGPLLAHRYSWAAHNTPRVQEPAVCIPGQEPLTASVLA
AAPLHEQKQMIGERLYPLIYNIHAPLAGKITGMLLEIDNSELLLMLESPESLNAKVEEAL
TVLQAHQAPEQTRVNVH
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgaacgccagcggccccggctacccgctcgcctcgctctacgtgggcgacctgcacccc
gatgtgaccgaggcaatgctctacgagaagttctcacccgccggccccatcctgtccatc
cgcgtgtgccgcgacgtggccacccgccgctcgctgggctatgcctacatcaacttccag
cagccggccgacgctgagcgggcactggacacaatgaactttgaggtgatcaaaggccag
cccatccgcatcatgtggtcccagcgagacccaggacttcgcaagtcgggtgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaggccttgtatgacaccttctcc
accttcgggaacatcctctcttgcaaggtggtatgtgacgatcatggctcccgaggcttt
ggctttgtccattttgagacctatgaggctgcgcaacacgccatcagcaccatgaacggg
atgctgctgaatgaccgcaaagtctttgttggccacttcaagtcccgacgggagcgagag
gcagagctgggaactcgggttatggagttcaccaatgtctatgtgaagaacctccacgtg
gacgtggatgagcggcgcctgcaggacctcttctcccagtttgggaagatgctgagtgtg
aaggtgatgagggatgacagtggccactcccgcggcttcggctttgtcaactttgagaag
catgaggaagcccagaaggctgtgatggacatgaacgggagggaggtgagtgggcagctg
ctctacgtgggccgggcccagaagcgggtggagcggcagaatgagctgaagcgcaggttc
gaacagatgaagcaggatcggctgacccgttaccagggcgtgaacctgtatgtgaagaac
ctggatgactccatcaatgatgagaaactgaggaaggagttctctccctatggggtcata
accagcgccaaggtgatgacagagggtgaccacagcaaagggtttggctttgtgtgtttt
tcctctccagaagaggcgacaaaggccgtgacagagatgaacgggcgcatcgtgggcact
aagccactgtatgtggcactagcccagcgcaaggaggagcggaaggccatcctgaccaac
cagtacatacagcgcctctccaccttgcgggccctgggcggccccctcctgggctccttc
cagcagcctgccaactacttcctgcccgcggtgccccagcccccagcccaggctccatac
tacggctctggcccaccagtccagcctgcccccaggtggatggcccagccacccagaccc
tcatccacctacccaccagctgcctcagtggtccggccagcagctgtgtctcggcgaccc
tcagcccatgtcggcggtgccaggcaggtctccacccacgtgcctcgcccggtgccccac
acccagggagtggccaacattggtacccagaccacaggacccagtgcagcgggatgctct
actccaagagggcctctcctggcacacagatattcctgggcagcacacaacacccccagg
gtccaggagcccgctgtgtgtatccccgggcaggagcccctgactgcatccgtgctggct
gcagccccgctgcacgagcagaagcagatgattggtgagcgtctctacccgcttatctac
aatatccacgccccgctggccggcaagatcacgggcatgctgctggagatcgacaactcg
gagctgctgctcatgctggagtccccggagtcccttaatgccaaggtcgaagaggctttg
acagtgttgcaggcacaccaggccccggagcagacccgagtgaacgtgcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (8)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (35)   

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