KEGG   Clostridioides difficile R20291: CDR20291_2052
Entry
CDR20291_2052     CDS       T00998                                 
Name
(GenBank) DNA mismatch repair protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
cdl  Clostridioides difficile R20291
Pathway
cdl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cdl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CDR20291_2052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdl03400]
    CDR20291_2052
DNA repair and recombination proteins [BR:cdl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     CDR20291_2052
SSDB
Motif
Pfam: MutS_V DUF4426 MutS_III
Other DBs
NCBI-ProteinID: CBE05075
UniProt: A0A9R0BL77
Position
complement(2401901..2403811)
AA seq 636 aa
MNSNTFERLQLNEVKDLIKIHCVSSLGKNLIDKLTPSGNIGVVRRKLAENKEARKIIENS
NHIPLEGLFNAGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKAFMLEKEFYSPTLSSYA
LNITECKSIEDEINYCIKSNKVDSNASKELKKIRRNIEITEGKIKDRLNKFITSTVNKKY
IQEFIISKRNDRYVIPIKSSYKNEVNGTILDTSSKGNTVFIEPISVSNLSTELTMLKADE
TIEEYKILSYLTELIFEKISQIKLNIEILSEYDMVFAKAKYSQKIKGITPKINNNGYIKI
IKGKHPLLTGDAVPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLTLMVQCGFDISAKE
GSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLVLFDEIGSGTEPNE
GAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDKETLEPLYKLTIGK
SEDSNALFISKKMGIKNRVLDRAKEYVIDRNYNLDLVKRSKLQSNIEDKNSSEVILSYTD
YNVGDKVKLLDEDDFGIVYKPMDKFNNVEVLFNDNFISVNIKRLQLSIKASELYPEGYDL
DVLFTSFKERKLEKDIQRGSKKALKKIQKEIRENRK
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgaatagtaatacatttgaaagattgcaactaaatgaagttaaagacttaataaaaata
cattgtgtaagttcgctaggaaaaaatttaatagataaattaactcctagtgggaatatt
ggagtagtaagaaggaaattagcagaaaataaagaagctagaaagataattgaaaatagt
aatcacataccacttgaaggattgtttaatgcaggttctacaatagataaaattgaaaaa
ggaatgataatagaacctgttgaacttgtaaatattgaagattttttaagaggttgtagg
aagatgaaagcttttatgttagaaaaagaattttattcacctacattaagttcttatgct
ttaaatataacagaatgtaaaagtatagaagatgagataaattactgtataaaatctaat
aaagttgattctaatgctagtaaagaattaaaaaagataagacgaaatatagaaattaca
gaaggaaagataaaagatagattaaataaatttataacatcaactgtaaataaaaagtat
atacaagagtttataataagtaaaagaaatgatagatatgtaataccaattaaatcttct
tataaaaatgaagttaatggtactatattagatacatcatcaaaaggaaatactgtattt
attgaacctattagtgtttcaaatttaagtacagagttaactatgctaaaagctgatgaa
actattgaagaatacaaaatattatcttatttaacagaacttatatttgagaagataagt
cagataaaattaaatatagagatactttcagaatacgatatggtatttgcaaaagctaag
tatagtcaaaaaataaaaggaattactccaaaaataaataataatggctatataaaaata
attaaaggtaaacatccacttctaacaggagatgcagtacctttagattttgaaataggc
aaaaattatagaagtcttataataacaggtcctaatgcaggaggaaaaactgtaaccctt
aagactgttggtttactaactttaatggttcaatgtggatttgatatttctgcaaaagaa
ggtagtgaatttagtgtatttgaaaaagtttttgtagatataggggataatcaaagtatt
gaaaatgccttaagtactttttcatcacatataaaaaatattgcagagattatgagttta
tcaaataattctactcttgttctgtttgatgaaataggaagtggaactgaacctaatgaa
ggagctggtttagcaatatcattattagaagagttttacaaaatgggatgtataactata
gcatcaactcattatggagagataaaaaagtttgctacattacatccagaatttgaaaat
gctggtatgatgtttgataaagaaacgttagaaccattgtataagttaactattggaaaa
tctgaagatagtaatgctctttttatttctaaaaaaatgggaataaaaaatagagtttta
gatagagctaaagaatatgtaattgatagaaactacaatttagatttagttaaaagaagt
aagctacaatctaatattgaagataaaaatagttctgaagtcattttaagctatacagat
tataatgtaggggataaggtaaaattactagatgaagatgattttggaattgtatataag
cctatggacaagtttaataatgtagaagtattgtttaatgataattttatttcagtaaat
ataaaaagattacaacttagcataaaagcatcagaattgtatccagaagggtatgattta
gatgtattatttactagttttaaagaaagaaaattagaaaaagatattcaaagaggttca
aaaaaagctcttaaaaagattcagaaagaaattagagagaatagaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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