KEGG   Castellaniella defragrans: BN940_15306
Entry
BN940_15306       CDS       T03058                                 
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
  KO
K09761  16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Organism
cdn  Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:cdn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cdn03009]
    BN940_15306
Enzymes [BR:cdn01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     BN940_15306
Ribosome biogenesis [BR:cdn03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    BN940_15306
SSDB
Motif
Pfam: Methyltrans_RNA PUA_4
Other DBs
NCBI-ProteinID: CDM25505
UniProt: W8X9V9
Position
3324681..3325424
AA seq 247 aa
MVIAPPAMPPPRFFCETPLDASRRVELPDALAHHALRVLRLADGAPIVLFDGRGGQYPAT
LRAEGRRALAELGAHEAVESELRGRLVLIQGLASGDKMDWIVEKAVELGVAELRPTAAER
SVLRLAGPRLDKRLEHWRAIARAASEQCGRNRLMRIHPPAPLAACLEAVDGPALFCHPEG
RLDFRAALADVRDGLTLMVGPEGGWSPEELALAQRRGLRGVRFGPRVLRTETAGLALAAA
ATALLDW
NT seq 744 nt   +upstreamnt  +downstreamnt
atggtcattgccccgcccgccatgccgcccccccgtttcttctgcgaaaccccgctggac
gccagccggcgcgtcgagctgccggacgccctggcgcatcacgcgctgcgcgtgctgcgg
ctcgcggacggcgcccccatcgtcctgttcgacggccggggcggccagtaccccgccacg
ctgcgcgccgagggccggcgcgccctggccgagctgggcgcgcacgaggccgtcgaaagc
gaactgcgcgggcggctggtcctcatccaggggctggcctcgggcgacaagatggactgg
atcgtggaaaaggcggtcgagctgggcgtggccgagctgcgccccacggccgccgaacgc
agcgtcctgcgcctggccggcccccggctggacaagcgcctggagcactggcgcgccatc
gcccgggccgccagcgagcaatgcggccgcaaccggctgatgcgcatccacccgcccgcg
ccgctggccgcctgcctggaggcggtggacgggccggcgctgttctgccacccggaaggc
cgcctggacttccgcgcggccctggccgacgtgcgggacggcctgacgctgatggtcggc
cccgagggcggctggtcgcccgaggaactcgccctggcgcagcgccggggcctgcgcggc
gtgcgcttcgggccgcgcgtgctgcgtaccgagacggccggcctcgcgctggcggcggcg
gccaccgccctgctggactggtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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