KEGG   Corynebacterium diphtheriae HC01: CDHC01_1408
Entry
CDHC01_1408       CDS       T01693                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
cdt  Corynebacterium diphtheriae HC01
Pathway
cdt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CDHC01_1408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdt03019]
    CDHC01_1408
Messenger RNA biogenesis [BR:cdt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CDHC01_1408
SSDB
Motif
Pfam: RNase_J_C Lactamase_B_2 RMMBL Lactamase_B
Other DBs
NCBI-ProteinID: AEX74654
Position
complement(1470170..1472224)
AA seq 684 aa
MTEPRSRARKVTRKAGPPEAAETPVFQAPDSTATAEPADSAVKNSEKAEKDSSAESSRNN
RGRNAQRGGRNRRGNGSSNRSSQSKNNQSSNRGRRTPVKSMQGADLTQRLPEPPKAPKNG
LRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIENKLDKVD
ALVITHGHEDHIGAIPWLLKLRPDMPILASKFTMALIAAKCREHRQRPKLIEVNEKSDIN
RGPFNIRFWAVNHSIPDCLGVAIKTGAGLVIHTGDVKLDQTPPDGRPTDLPALSRFGDEG
VDLLLCESTNATVPGFSGSEADVAPTLKRLISDAKQRVILASFASNVYRVQAAVDAAVAA
GRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVVLITTGTQGEPMAAL
SRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVMNMLSQIGATVVTGRDAKVHTSGH
GFAGELLFLYNAARPKNVMPVHGEWRHLRANKELAISTGVEADRVVLAQNGVVVDLVDGR
ARVVGQMQVGHLYVDGVTMGDIDAEVLEERTSLGEGGLIAITAVIDSRTARLLERPTVQA
KGFSEDAVAMMPEVTELVEKTMNDLAAEGENDPYRMVQQLRRRVSRFVEQKWRRKPMIMP
TVIPTTSATIDIDDADVRASRESQ
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgactgaacctcgtagccgtgcgcgcaaggttacccgtaaagctggacctccggaagct
gcggagacgccagttttccaagcacctgattctactgcgacggctgagccggcagattct
gccgtaaagaactccgaaaaggctgaaaaagattcttctgcggagtcttcacgaaacaac
cgcggacgcaacgctcagcgcggtggtcgtaatcgtcgtggaaatggttcttctaatcgt
tcttcacaatcgaagaacaaccagtccagcaatagaggacgacgcacccctgtgaaatcg
atgcagggtgcagatcttacgcagaggctgcctgagccacctaaggctccgaagaatggt
ctgcgcatttatgccttgggtggtatttctgagattggtcgtaacatgaccgtcttcgag
tacaacaatcgtttgttgatcgttgactgtggcgttttgttcccgtcatcgggtgagccg
ggagtggacctaattcttccggactttggaccgatcgagaataagctcgacaaagttgat
gctttggtgattactcatggtcacgaagaccacatcggtgcaattccgtggctgcttaag
ttgcgtccggatatgccgattttggcttccaagttcactatggcattgattgctgcaaag
tgccgtgagcatcgtcagcgtccgaagctcattgaagtgaacgagaaatcggatatcaac
cgcggtccgttcaacattcgcttctgggcagtcaaccactcgattcctgattgcctcggc
gttgctattaaaactggtgccggattggttattcatactggcgacgtgaagcttgatcag
accccaccagatggtcgcccaaccgatttgcctgcactttctcgcttcggtgatgaggga
gtggatttgcttctttgtgagtcaaccaatgcgactgttccgggattctctggttctgaa
gcagacgtggctccaactttgaagcgcctgatcagtgatgcaaagcaacgtgttatcttg
gcgtcattcgcatcaaacgtctatcgcgttcaggcagccgttgatgcggctgttgctgcg
ggtcgtaaggtagcgtttaatggacgctccatgattcgaaacatggaaatcgccgagaag
atgggctatttgaaagcccctcgtggcaccattgtcagcatggatgatgcagccaagatg
gcgccgcacaaggttgtactgatcacaactggtacccagggcgaacctatggcagctttg
tcgcgtatggcacgtcgtgagcatcgacaaatcactgttcgtgatggcgatttgatcatt
ctgtcgtcttcattggttccaggtaacgaagaagcagttttcggtgtaatgaatatgctg
tcccagattggtgcgactgtggtaactggccgtgatgccaaggtccacacctcgggacac
ggattcgccggagagctgttgttcctatacaacgctgctcgtcctaagaacgtcatgccg
gttcacggcgaatggcgacacctgcgggctaacaaggaactggctatttccaccggtgtg
gaagcagaccgagttgtattagctcaaaacggtgttgtagttgaccttgttgatggtcgt
gctcgtgttgttggtcagatgcaggttggacacctttatgttgatggtgtgaccatgggc
gatattgatgctgaagttttggaagaacgtacttccttgggtgaaggcggcttgatcgct
attaccgcagttattgattcgcgtactgctcgattgcttgagcgtccgacagtccaagcc
aagggattctctgaagacgcagtagcgatgatgccagaggtaactgagctggttgaaaag
acgatgaacgatctggctgcagaaggcgaaaatgatccatatcgtatggttcagcagttg
cgccgtcgtgtttcacgattcgtcgagcagaagtggcgtcgtaagccaatgattatgcca
acggtcatcccgactacatcagcgaccatcgatatcgatgacgctgatgtgcgtgcgagc
cgcgaaagtcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system