KEGG   Caenorhabditis elegans (nematode): CELE_K08A8.2
Entry
CELE_K08A8.2      CDS       T00019                                 
Symbol
sox-2
Name
(RefSeq) Transcription factor sox-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cel03000]
    CELE_K08A8.2 (sox-2)
Transcription factors [BR:cel03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    CELE_K08A8.2 (sox-2)
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp
Other DBs
NCBI-GeneID: 181002
NCBI-ProteinID: NP_741836
WormBase: WBGene00004949
Ensembl: WBGene00004949
UniProt: Q21305
Position
X:complement(<7458282..7463736)
AA seq 283 aa
MMMDPDSAKMQDYSGWSFGFHMPPTSSTNLLPQSMPDDLSNGPDSPDSTGKDGKKNDDRV
KRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIH
MKEHPDYKYRPRRKTKSINKKNGAPIPFGNLDTKTPSYPTLTTNWNATNQYIDQFRFAPY
PTTTVMDQIPFSLTYPVHSVPTDNSSPSQFQPSPMSTNFAGSYLTPKSESSPVGSDSTVG
TVDSSQFRAYYDHTKDQMMYPYSIELTHAQNIQNALSQSHVTS
NT seq 852 nt   +upstreamnt  +downstreamnt
atgatgatggatccggattcagcaaaaatgcaggactactcgggttggtcgtttggattt
cacatgccaccaacatcttcaacaaatcttctcccgcagtcaatgccagatgatttgtca
aatgggcccgatagccctgattcaacaggaaaagacggaaagaagaatgacgacagagtg
aaaaggccaatgaatgcatttatggtttggagcagaggacagcggaagaaaatggctctg
gaaaatccaaaaatgcacaattctgaaatcagcaaacgtcttgggacagaatggaaaatg
ctcagtgaacaagaaaaaagaccattcatcgatgaagcgaaacgactacgcgccattcat
atgaaggaacacccagactacaaatacagaccgagaaggaagacaaagtcaattaataag
aaaaatggagcaccaattccatttggaaatttggacacaaaaacgccatcttatccgacg
ttaacaaccaactggaatgcgacaaatcagtatattgatcagtttcggtttgctccgtac
cccacaacaactgtaatggatcaaattccattctcgttgacatacccagtgcattcggtc
ccaactgacaactcgtcgccttcgcagttccagccatctccgatgagcacaaattttgct
ggcagctacctgacaccaaaatcagagagctcgccggttggcagtgattctacagtcggc
accgttgactccagtcagtttcgtgcttactacgaccacacaaaggatcagatgatgtat
ccgtacagtattgaattgactcatgctcaaaacattcaaaatgctctttcccaatcccat
gttacctcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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