KEGG   Caenorhabditis elegans (nematode): CELE_T04F3.2
Entry
CELE_T04F3.2      CDS       T00019                                 
Symbol
smoc-1
Name
(RefSeq) Thyroglobulin type-1 domain-containing protein
  KO
K24354  SPARC-related modular calcium-binding protein
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cel00536]
    CELE_T04F3.2 (smoc-1)
Glycosaminoglycan binding proteins [BR:cel00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   CELE_T04F3.2 (smoc-1)
SSDB
Motif
Pfam: Thyroglobulin_1 SPARC_Ca_bdg EF-hand_7 EF-hand_1 EF-hand_6
Other DBs
NCBI-GeneID: 179609
NCBI-ProteinID: NP_505964
WormBase: WBGene00011437
Ensembl: WBGene00011437
UniProt: Q22157
Position
V:11757658..11758866
AA seq 260 aa
MRPEHLSLQLLAWIYLINGNPIVQKGGLEVLDITDSNDLSVRQRFEEVIRLDCASQRRKA
LKRKTDGDARIYIPTCSPKNSLLYDKVQCYDVSIYCWCVDELSGEPKLGSSTTRGKPKCE
ETPTTTVAPKRVRRNNRCKEKKRTRFLRRLVSTLKSEMIMSGINATKVSRDSAIRWKFNQ
LNINHNNVLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNKDRKLTFDEWRKCIVQEIN
RVPAKRPDQLNPFLYILRSE
NT seq 783 nt   +upstreamnt  +downstreamnt
atgcggcccgaacacttgtctttacaattattggcttggatatacttgattaatgggaat
ccaattgttcagaaagggggacttgaagttctggatattactgactcaaatgatttgtct
gttcgtcaaagattcgaagaagttatacgtctagattgtgcatcacaaagacgaaaagca
ttaaaaagaaaaactgacggagatgctagaatttatattccaacatgttctccaaaaaac
tcattattatatgataaagtgcaatgctatgatgtttcaatttattgttggtgtgtggac
gaactgtccggagagccaaagttaggctcatcgacaacaagaggaaaaccaaaatgtgaa
gaaactccaacaactacagttgctccaaaaagagtgagaagaaacaatcggtgtaaggaa
aagaagagaacacgatttctgaggcgattagtatcaactctcaaatcagaaatgataatg
agtggaataaatgcaacaaaagttagcagagattcagcaattagatggaagtttaatcaa
ctcaatataaatcataataatgtgcttgaaagaagtgaatggaaaccttttaaatcagtt
ttgttagaatggaagaatgtcagacagtgctccagaaatcttttcaaaacttgcgatctg
aataaggatagaaaattgacattcgatgaatggagaaaatgcattgttcaagaaatcaac
cgagtaccagccaaacgtccagatcaactaaacccattcctgtacattttaagatcagaa
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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