KEGG   Caenorhabditis elegans (nematode): CELE_T08B2.5
Entry
CELE_T08B2.5      CDS       T00019                                 
Symbol
rbm-5
Name
(RefSeq) RNA-binding protein 5
  KO
K13094  RNA-binding protein 5/10
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cel03041]
    CELE_T08B2.5 (rbm-5)
Spliceosome [BR:cel03041]
 Complex A
  Other components
   Complex A specific factors
    CELE_T08B2.5 (rbm-5)
SSDB
Motif
Pfam: G-patch OCRE G-patch_2 RRM_1 zf-RanBP zf-C2H2_2 AF-4 Vps36-NZF-N
Other DBs
NCBI-GeneID: 172312
NCBI-ProteinID: NP_491793
WormBase: WBGene00020346
UniProt: Q9BIC2
Position
I:6215727..6219912
AA seq 925 aa
MLPFVFNADDDGKRVQNEEGNYDPTDHQRQMEDYYKQYEEQRQVANSFHNTTGRPDLVAM
QARLAETEQAIHRLNEEKKQPPPGFPIMTTPATQPEISIPRSGENKSSRSPSWAREARRS
RSRSRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHWSSSN
RHSRRRRSRSYSRERDRNSRRDDRRSNLSNNDRYSDWNPGVPSNKLAILNMPNDVDNTKI
TLSLGKCGYLPQDVRTMTKFDKNTKQIRTFAFVEFSNRETAEQWMTDYEGWLTLDDGRTL
AVEYAKGDPAAGSGNKGDDWICAHCSMNNFVKRQTCFKCEISKDQSMELEKLGAHMVGMT
PCDTLLIRGLPDGINNSLIFDSLGALVCLSSISMIKLSESKRFAYLQMKSADEAKMLLNL
TYKSPIRIKDKDVQVSWCRDSMSKLIQQQMTMLTAGPGKNSVATGSLAQGNMTGAEIAAA
ALSKANAVRQASQQVGQIMTGLPAPAANMIPPNFSVPPPNLSVPPPMQATQPEHQNGVIG
MTQTPKGLLPRYLPPNPLTFAHDPNLGYYVDPITKFCYDSATGYYFNNATSQWCNWDLTH
HTYFPVETPAVINSADPEEEKMKKNEEGPKTAQDLVKDMAKWAKRQEKDKKKVQISIKGK
ETKGIELKNVFSNEKQKRIAQTAALFDDDEEEDQEEEVRGRRSEEPSTSSSFSSVPLAPR
KSTLQDVRDAMERALYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLEAKRAEWGRE
TAAKLQEEEEDASAPDLPKIVYRDRAKERRRQFGIDSTGYAFDVMGGPPGPTSVRHEETI
RKVSEEASKRPLDESNIGNRLLKSMGWKEGQGVGKHAQGIVNPIEAERFVQGAGLGAAGS
KMRHGAEASHKEKTRQALYSRYHDA
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgctaccttttgtgttcaacgctgatgatgacgggaaaagggttcaaaatgaggagggt
aactatgatcctaccgaccatcagcgccaaatggaagactattacaaacaatacgaagaa
cagaggcaggttgccaattcgtttcacaacaccactggaagacctgatttggttgcaatg
caagcacgtctagcagaaaccgaacaagcgatccaccggctgaatgaagaaaaaaaacaa
cccccaccaggatttcctataatgacgacaccggcaacgcaaccagaaatttctatacct
cgttctggagaaaataaaagctctcggtcaccttcgtgggcgcgtgaagcaagacgttct
cgttccaggagccgcgatagacgcggaggtagaagcagaagcagatcaccatctagacgt
cgaactagtcgtgatcgccgagatgaccgcagcagccgtcgtagaagagatcgaagtcac
tcgcgaagccgttcaccaccttcgtctgcaaatggttcctctcattggtcgtcgtcaaac
cgccactccagacgacgacgctccagaagctacagcagagaaagggatagaaactcgcgt
cgcgatgatcgccgcagcaatctttcaaataatgatcgatattcggattggaatcctgga
gttccatcaaataaactcgcaattttgaatatgccaaatgatgtggacaacacgaagata
acactttcattgggaaaatgtggataccttcctcaagacgtgcgcaccatgacaaaattc
gataaaaatacaaaacaaattcgtacttttgcttttgttgagttctctaatcgagaaact
gcagaacagtggatgacggattacgagggatggttgactctggatgacggaagaactctg
gctgtagaatatgcgaagggagatcctgctgctggatccggaaacaaaggggatgattgg
atttgtgctcattgctctatgaacaattttgtaaagcgtcaaacctgcttcaagtgtgaa
atttcaaaggatcagtcaatggagcttgagaaactcggagcacatatggtcggaatgaca
ccttgcgacactcttctaattcgtggtcttcctgatggtatcaataatagtcttattttt
gatagtctcggtgctctggtttgtctcagttcgattagcatgatcaaattgtcggaatcc
aaaaggtttgcgtacttgcaaatgaaaagtgcggatgaagcaaaaatgttactcaatttg
acatataaatcgcccattcgaattaaggataaagatgttcaagtttcctggtgtcgtgat
tcaatgtcaaaactcattcaacaacaaatgaccatgctaaccgcgggacctggaaagaat
tctgtggctaccggaagtctggctcaaggaaacatgactggagctgaaattgctgcagct
gccctttctaaagcaaatgctgtgcgccaagctagtcaacaagttggtcaaattatgact
ggattgcctgcacctgctgctaatatgattcctccaaacttcagtgttccaccaccaaat
ttgtctgttccacctccaatgcaagccactcaaccggaacatcaaaatggagtcattgga
atgacccagactccgaaaggacttttgccaagatacttaccacccaatccgcttacattc
gctcatgatccgaatcttgggtattacgtagatccaatcacaaaattctgttacgattca
gcaactggttattatttcaataatgcaacttcacaatggtgtaattgggatcttactcat
catacttatttcccagttgaaaccccagctgtaatcaattcagctgaccccgaagaggaa
aagatgaagaaaaacgaagaagggccaaaaacagctcaggatttagtgaaagatatggca
aaatgggctaagagacaagaaaaagacaaaaagaaagttcaaatttctataaaaggaaaa
gagacgaaaggaattgaattgaaaaatgtattttctaatgagaaacagaaaagaatagca
cagactgcagcactttttgatgatgacgaagaagaggatcaagaggaagaagttcggggt
cgtcgttctgaagaaccgtctacttcatcctcattttcatctgttccacttgctcctcgg
aaatccactcttcaagatgttagagatgctatggaaagagcactttacgatgaaacgaag
aaaacatgtatgctctgcaaacgagcattctctgatgttgaagtacttcggaaacatgtt
gaaaaaagtgatttgcatagaaacaatttggaagcgaagcgagccgaatggggacgagaa
acagctgctaaattacaagaagaagaagaagatgcttcagctccagatctccctaagatc
gtttacagggacagagccaaagaacgtcgtcgtcagttcgggattgattccactggttat
gcattcgatgtgatgggtgggccgccaggacccacatcggtgagacatgaagagaccatc
cgaaaagttagtgaggaagcttcgaagcgcccattagacgaatcaaacatcggaaataga
ctgctgaaaagtatgggctggaaagaaggacaaggagttggaaagcatgcacaaggtatt
gttaacccgattgaagctgaacgatttgttcaaggagcaggtttgggtgctgctggatcc
aaaatgagacatggtgcagaagcgagtcacaaagagaagacgcggcaagcactctacagt
cgttatcacgacgcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (82)   

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