KEGG   Caenorhabditis elegans (nematode): CELE_Y56A3A.17
Entry
CELE_Y56A3A.17    CDS       T00019                                 
Symbol
npp-16
Name
(RefSeq) Nuclear pore complex protein npp-16
  KO
K14295  nuclear pore complex protein Nup50
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CELE_Y56A3A.17 (npp-16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cel03019]
    CELE_Y56A3A.17 (npp-16)
Messenger RNA biogenesis [BR:cel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CELE_Y56A3A.17 (npp-16)
SSDB
Motif
Pfam: Ran_BP1
Other DBs
NCBI-GeneID: 176623
NCBI-ProteinID: NP_499551
WormBase: WBGene00003802
Ensembl: WBGene00003802
UniProt: Q7K6X4
Position
III:11915928..11917873
AA seq 497 aa
MNSLIPPPTSEQQMNMFRLRDKMSLLNAEFLKVINGYFTEKNHYDFSGTMKSYMDHVAQL
KQIYKVDDDVAADMTVPRRTENSSESSGETVAPRKIAKAVRKNGTPKNPLNSTVFAASSP
AATVASVPKFGDISVITKETPAPLAKTAEPLVAPAAPATARKRAIRGGGPLGGAESVVFK
SGEDGQAATSSVKIPATTIKFPEPTKDFWTKKSDAPAAPSNSGSLFAFLGKDGDKPKETP
KFSGFSFGKKPAEPSEEPKAADSTPKLTFGSPKEADLPKPASSLFGASPSKPLVFGGSSA
DSTTSAPKPFSALSTAASLFGSSSASTTTTATQPLSFGSSSTGGSSLFSGFAGLAQKAME
NQNQAKPEGSGEDDEGEYVPPKVETVENQEPDAVLSSKVSVFKFTGKEYTKLGVGMLHIK
DNDGKFSVLIRAATATGTVWLNSLCNKAMKATVVDAKGDRIRLTCPSSSTEMATMMIRFG
TADGAKKFTDKILEVAV
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgaattccctaattccaccgccaacttctgagcaacaaatgaacatgttccggctccgc
gacaaaatgagcctcctgaatgcagaatttctcaaagtcatcaacggatatttcacggaa
aagaatcattatgatttttctggaactatgaaatcatatatggatcatgtggcacagctc
aagcagatttataaggtcgatgatgacgttgcagccgatatgacagtgcccagacgaacc
gaaaactcgtctgaaagttctggagaaacagttgctccgcggaaaatagccaaagctgtg
cggaagaatggaacgccaaaaaatccgctgaattctacagttttcgctgcctcgagcccg
gcggcgacagtcgcgtctgtgcccaagtttggcgacatttcagtgataaccaaggaaacg
ccagctccactcgcaaaaaccgcagagccactcgttgctccagcagctccagcgaccgcc
cgaaaacgcgcgattcgtggcggaggacctctcggtggagctgaatcagtggttttcaaa
tcgggcgaagacggacaagccgccacgtcgagtgtgaagattccggctacgacgatcaaa
tttccggagcccaccaaggatttctggacgaaaaagtctgatgcgccggcggctccgagt
aattcaggctcacttttcgcatttttgggaaaagatggcgacaagccgaaggaaactcca
aaattcagtggattctcgttcggaaagaagcccgccgagccttccgaagagccaaaagct
gcggattccacaccaaaattgacatttggctcaccaaaagaagcagatttgccgaaacca
gctagctctctattcggagccagtccttctaagcctctggtgttcggaggaagctccgca
gactctaccacatcggctccaaaacctttctcggctctttccacggcagcttcattattt
ggatcaagctctgcctccaccaccaccaccgccactcaaccattatcatttggctcaagc
tccactggaggctcaagccttttcagcggattcgctggtctcgcacagaaagccatggaa
aatcagaatcaggcgaaaccagagggttctggtgaagacgatgagggagaatatgtgcct
ccgaaggtggaaaccgtcgaaaatcaggagccggatgcagtgctgagcagcaaagtatcc
gtgttcaagttcaccggaaaagaatacacaaagcttggagttggaatgctgcacattaaa
gacaacgatggaaaattcagtgtgctcattcgagccgccacagcgaccggaacagtctgg
ctgaattctctgtgcaataaggcgatgaaggcgacagttgtggacgcgaaaggtgaccgg
atccggctgacatgtccgtcttcgagcaccgaaatggctacgatgatgattcgattcggg
acggctgatggagccaagaagttcaccgataaaattctagaagtcgctgtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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