KEGG   Caenorhabditis elegans (nematode): CELE_R11A5.1
Entry
CELE_R11A5.1      CDS       T00019                                 
Symbol
apb-3
Name
(RefSeq) AP-3 complex subunit beta
  KO
K12397  AP-3 complex subunit beta
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04142  Lysosome
Brite
KEGG Orthology (KO) [BR:cel00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    CELE_R11A5.1 (apb-3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_R11A5.1 (apb-3)
Membrane trafficking [BR:cel04131]
 Endosome - Lysosome transport
  Others
   AP-3 complex
    CELE_R11A5.1 (apb-3)
 Endosome - Golgi transport
    CELE_R11A5.1 (apb-3)
SSDB
Motif
Pfam: Adaptin_N Cnd1 AP3B1_C HEAT_2 Nop14 CIS_TMP Merozoite_SPAM BUD22 DDHD DUF4045 Astro_capsid_p CDC45
Other DBs
NCBI-GeneID: 172553
NCBI-ProteinID: NP_492170
WormBase: WBGene00000163
Ensembl: WBGene00000163
UniProt: O45718
Position
I:<7853750..7857853
AA seq 945 aa
MTSFVEGLTSPEMEIAEGGVILDNRTRFADLKAMLDSNKDNLKVDAMKRIINLIAKGKDV
SELFAAVVKNVAAKNVELKKLVFVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRGSAL
RVLTSIRVPMVAPIMLLAIKDAVRDMSPYVRKVAAHAIPKLYSLEPELEPQLVDCIDFLL
ADRRSLVLGSAVYAFDEICPHRLDLLHKHFRALCRGLADVDEWGQIVMINMLTRYARHEL
ADPDRGPPDTDVVLLLNSARPLLQSRNCSVVMAVVQLFYHVAPKAQLSQIARALVRLLRG
PRETQYVVLTNIATICERNPVEEGTYAISKTMFDPFLKSFFVRSCDSSLVKKLKLHVLTS
LVSEANVHIILRELQTYVHMSDLASPAVEAIGRCAVRVGAVSDQCMTGLVQLISSSDEKV
VCSAVVVIKRLLHASAPLNLLSRLMRLMPNMIAAQARACVIWLVATHVEQVLHMAPDFLR
LIAKKFSTENELVKLEALKLAVKLWLVKRDDSEKIVQYVFQLARFDLSYDVRDRCRFLRN
LMFNTEILSQHMEEIFMSKKPAPELISSFKERDKFQLGSLSHVLNQRCTKYIDLPEFPAT
SSDSLLRKEAHAPNELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEE
DDEDEESEEESDEEDEEEEEEDDSEPEEKPNPKPSTKKQALILNKSKPMNGKPKTERNDL
DLLIDVDFSAAGSRQIMDATHIEEKEIELLNVIEGNGLILSISYPRINDGQYTAIRFGIT
NKTDGDLLGVELKTEEGLDVKGNSIIGDIPSGARVSVDLLVDFGDSATSREWILTRDDGH
EKHFRFEVPYGEQVQPIRLSPEDISKERSRLGGLNRHVIQLENPINPSSIALFVNAFSSD
LTIFTCQTRSRKDVCILTVSEKSIECCCDNSVIGRMLAFSVSKNC
NT seq 2838 nt   +upstreamnt  +downstreamnt
atgacgtcgttcgtcgaagggttgaccagccctgaaatggaaattgctgagggcggagtc
atcttggataataggacacgattcgctgacctaaaagccatgctggatagtaataaagat
aacctaaaagttgatgcaatgaaacgaataattaacctgatagcgaaaggaaaagatgtc
agtgaactatttgctgcagttgtgaagaacgtagcagcaaaaaatgtggagctgaaaaag
ttggtatttgtttatcttgtacgatatgccgaagaacaacaagatcttgcacttctctcg
atatcaactttccaacgggctctcaaagatccgaatcaactgattcgtggaagtgctctc
cgagttttaacatcaatccgtgttccgatggtcgcaccaatcatgcttttagccatcaaa
gatgcagtacgtgatatgagtccatacgtgaggaaagttgctgcacatgccataccaaaa
ctatactcactggaacctgaactcgaacctcagcttgtcgattgcatagattttcttctc
gctgatcgaagaagtttagtactcggtagtgctgtttacgcatttgatgagatctgtcca
caccgactcgatcttcttcataaacacttcagagcattatgtcgtggtttggcagatgtc
gacgaatggggtcaaattgtgatgatcaacatgttgactagatatgcaagacatgaattg
gcggatccagatagaggaccacccgatacggatgttgtacttcttctcaactcagctcgt
cctctacttcaatcaagaaattgttcagttgtcatggcagtcgtacaattattttatcat
gttgcgccgaaagctcaactctctcagatcgcccgtgcacttgtccgacttctacgtggt
ccacgggagacccaatacgtagttctcaccaacattgcaacaatatgcgaacgaaatccg
gtagaggaaggaacttacgccatctcaaaaacgatgttcgacccgttcctaaaatcattc
ttcgtacgatcctgtgacagttctctcgttaagaaactaaaacttcatgtgctcacaagt
ttggtttcagaagcgaatgttcatatcattttgagagagttacagacctatgttcatatg
tctgatttagcttctccagctgttgaggcaattggaagatgtgcagttcgcgtcggagca
gtatcagatcaatgtatgactggacttgtccaattgatttcttcttccgatgagaaagtc
gtatgctctgctgtagttgtcatcaagagacttttgcatgcttctgcccctctgaatctt
ctttcaaggcttatgaggctcatgccgaatatgattgcagcacaagcgcgagcttgtgtc
atttggctcgtcgccacccatgtcgaacaagttctacacatggctccagactttttgagg
cttattgcaaagaaattttcgacggaaaatgagctggttaaactagaagctctgaaactt
gcagtgaagttgtggcttgtgaagcgtgatgactctgaaaagattgtacaatacgtattc
caacttgcccgattcgatctcagttatgacgttcgtgatcgatgccgatttttacggaat
ctaatgttcaatacggagattctttcacagcatatggaagagattttcatgtcgaaaaag
ccagcaccagagcttattagtagtttcaaggaacgtgataaattccaattgggatctctg
tcacatgtgttgaatcaaagatgtacgaaatacattgatctacccgaattcccagcaaca
tcaagtgattcgttattaagaaaagaagcacatgcaccgaatgaattgaaattggatgat
agtgacgaagaagaagatgatgatgatgaagatgaagaagaagacgaagatgaagaagag
gaggatgaagatgaagaagatgaggaagaggaagaaaatgaatcagaagaagaagaggaa
gatgatgaggatgaagaaagtgaagaggaatctgatgaagaagatgaagaggaggaagaa
gaggatgatagtgagccagaggagaagcctaacccaaaaccatctactaagaaacaagca
ctcattctcaataaatcaaaaccaatgaatggtaagccaaaaacagaaagaaatgatctc
gatttgctgattgacgttgatttctcggccgcgggaagtcgtcaaataatggatgcaact
catatcgaagaaaaagaaattgaacttttgaatgtaattgaaggaaacgggctaatatta
tcaattagttatccgcgtattaatgatggacaatacacggctattcgatttggaatcaca
aacaaaaccgatggagatttgttaggagttgaattaaaaactgaagaaggtctcgatgtg
aagggaaactcgattattggagatattccgtctggagcacgagtttctgttgatttgctc
gtagattttggagatagtgcgacaagtagagaatggatacttacaagagatgatggtcat
gagaagcatttcagatttgaggtcccatatggtgagcaagttcaaccaattcgtctgtct
ccagaagatatttcaaaagaaagaagtcgtcttggaggtctcaatcggcatgtgatacaa
ctcgaaaatcccattaatccttcgtcaattgctctatttgttaacgcattttcttcggat
ttgaccattttcacttgccagacacgttcacgaaaggatgtttgtattctgacagtttca
gaaaaatcgattgagtgctgttgtgacaactcggtgataggacgaatgctggcgttctct
gtctccaaaaattgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (53)   

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