KEGG   Caenorhabditis elegans (nematode): CELE_ZK1320.6
Entry
CELE_ZK1320.6     CDS       T00019                                 
Symbol
arc-1
Name
(RefSeq) E3 ubiquitin-protein ligase arc-1
  KO
K07963  tripartite motif-containing protein 23 [EC:2.3.2.27]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cel04121]
    CELE_ZK1320.6 (arc-1)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:cel04031]
    CELE_ZK1320.6 (arc-1)
Enzymes [BR:cel01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     CELE_ZK1320.6 (arc-1)
Ubiquitin system [BR:cel04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    CELE_ZK1320.6 (arc-1)
GTP-binding proteins [BR:cel04031]
 Small (monomeric) G-proteins
  Arf/Sar Family
   Others
    CELE_ZK1320.6 (arc-1)
SSDB
Motif
Pfam: Arf Roc G-alpha MMR_HSR1 Ras zf-B_box Gtr1_RagA zf-RING_UBOX SRPRB zf-RING_5 Apolipoprotein zf-RING_2 Baculo_PEP_C AAA_18 zf-C3HC4 CEBP_ZZ AAA_16 DASH_Spc19 Spectrin
Other DBs
NCBI-GeneID: 174525
NCBI-ProteinID: NP_496089
WormBase: WBGene00000180
Ensembl: WBGene00000180
UniProt: Q09654
Position
II:9674978..9677210
AA seq 539 aa
MNEYGCNVCNEEYSARDPLKCPRVLTGCGHTICHNCAISIAGRNSSIFCPFDRTATQIPG
GDLQNLKKNFALLELLEKIADGGGLLEKSGEVVKFDRYSKERLLNLECDEDSEHVAVIYC
TVCDSNLCERCSESTHSTNVLSKHRRIPLTEKPPPLVHCRLHSSYVVEFVCKELSCDTES
PLMCMMCRDYGRHKGHSHVLIEKEVEDLREKVREHLGELSKQSETIGNALHSIDSVIHEL
TPGQEDGSLEETRQEVRNHFRRLRTALDRDEEDAVETVDRYARNRVESLQTQKERLEAIS
SKIGNTCTTLQKALIMERGKILDRKDDLLALAESTAAEPTAVLDQSQLSTRIAFSFLNDR
KLHIGDFIESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNF
WDVGGLPKLRHLWKHYYSNAQAIFYVIDGYAVERFSEAIKELNRVMSDPLVGTCPVIVAV
NRKDGYALNGHMDALLSQLEALPFQHHFHCCDAATGSGIDQIIDQITVCLSRLNGTCPV
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgaatgaatatggttgcaacgtgtgcaacgaggagtattcggcacgggatcctttgaaa
tgtccacgtgttttgacgggttgcggccatacaatttgccacaattgtgccatatcaatt
gccggtcgaaattcgtccattttttgcccatttgacagaacggcaactcaaattcctggc
ggagatcttcaaaatctcaaaaagaatttcgcgttgttagagctgctcgaaaaaatagcc
gacggtggtggattgctggagaagtcgggtgaagttgtgaagttcgatcgttactcgaaa
gaacgtcttctgaatttggaatgtgacgaggattcggaacacgtggcagttatctattgc
acagtttgtgatagtaatttatgtgaaagatgttccgagagcacacactccaccaatgtt
ctatctaaacatcgtcgaattccattaaccgagaagcctcctccacttgttcattgtcgc
ctacattcatcatatgtcgtggaattcgtttgcaaggaactctcctgtgacaccgagagt
ccgttgatgtgtatgatgtgtagggattatggtagacacaagggtcatagtcatgtacta
atcgaaaaagaagtggaagatttgagagaaaaagttagagagcatttgggagagctgtca
aagcagtcggagacaattggaaatgcacttcattcgattgattcagttattcatgagttg
actcctggacaagaagatggcagtttggaggagacccggcaagaggttcgcaatcacttc
cgtcggctacgaacagctctggatcgagatgaagaggatgcggtggaaactgtagatcgg
tatgctcggaaccgcgtcgagtcgttacaaactcaaaaagagagactggaagctatttct
tcaaagatcggaaatacttgtactaccttacaaaaagctttgataatggagaggggaaag
attttggatcggaaagatgatttgttggcgctggcggaatcaactgctgctgaacctact
gcagttctagatcaatcacagttgagcacaagaattgctttttcatttttaaatgatagg
aaattgcatatcggagatttcatcgaaagtcgagttgttttgttaggtcttgatggtgct
ggcaaaacttcaatagtccgccgtttaaagaaagttcaaatggacacagtaatggctcca
catccaacaatcggtttcaacatcgaaacgattcattataaaaattatcgtctcaacttt
tgggacgttggcggattgccaaaacttcggcatctttggaaacattattattcgaatgct
caggcgatattctatgtgattgatggatatgctgtggaacggttttccgaagcaattaag
gagttgaatcgagttatgagtgatccgttagttggaacatgtcccgttattgtagctgta
aacaggaaagatggatatgctctaaacggtcacatggatgcgttactatcccaactcgaa
gctctcccattccaacatcattttcattgttgcgatgcagcaactggatcaggaattgac
caaattattgatcaaatcacagtttgcctcagtcgtcttaatggtacatgccctgtatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (47)   

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