KEGG   Caenorhabditis elegans (nematode): CELE_C28H8.9
Entry
CELE_C28H8.9      CDS       T00019                                 
Symbol
dpff-1
Name
(RefSeq) Zinc finger protein dpff-1
  KO
K13196  zinc finger protein ubi-d4
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CELE_C28H8.9 (dpff-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cel03041]
    CELE_C28H8.9 (dpff-1)
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_C28H8.9 (dpff-1)
Spliceosome [BR:cel03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    CELE_C28H8.9 (dpff-1)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    CELE_C28H8.9 (dpff-1)
SSDB
Motif
Pfam: DPF1-3_N PHD PHD_4 Lar_restr_allev zf-RING_2 Prok-RING_1
Other DBs
NCBI-GeneID: 175832
NCBI-ProteinID: NP_498281
WormBase: WBGene00016200
Ensembl: WBGene00016200
UniProt: Q09477
Position
III:complement(5903563..5906346)
AA seq 372 aa
MISENGYMDLMRNCIKWNSRQMEDRKKRLRFPYYEHQTATAQRESRFTTRNVDHMYPSND
PNTVVQFATERWKKSKSQPPSDAVEMSMFLRENPSIQVAIDHLTPQVVGPTTESVSDSSN
DSTTIRPSRQTQIKEEYRDDYVLDDELSPDEFGSDEDDWSSRKRRKGNLGPVQKATSSRK
KVPTTRSSVSRLTPSRSIVKETKYEEPEEKTYPCDKCSAKYKSLAGLSYHQSYLHDQKSS
QPLVKLLSPSIEISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGHPSCLNFNQNVTKI
IKRSGWQCLECKSCTICGTSENDDKLLFCDDCDRGYHLYCLTPALEKAPDDEYSCRLCQV
EFGDKASAPAKK
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgatctcggaaaacggatatatggacctgatgcggaactgcattaaatggaattcccgg
caaatggaggatcgtaaaaaacgactgcggttcccatactatgaacatcaaacggctacg
gcccagcgagagtctcgcttcacaacccgcaacgtggatcacatgtatccatcaaatgat
ccaaatactgttgttcaattcgcaaccgagagatggaagaagagcaagtcacagccacca
tctgatgctgttgagatgagcatgtttttgcgtgagaatccgtctattcaggttgcaatt
gatcatctcactccacaagttgtcggaccaacaactgaaagtgtttctgatagttcgaac
gactcaactaccatcagaccatcccgccaaacacagatcaaagaggaatatcgtgatgac
tacgttcttgacgatgagctctctccagacgagtttggctccgatgaagatgattggtcg
tcgcgtaaacgccgtaaaggcaacttggggcctgttcagaaagcaacttcgtcacgtaaa
aaggtaccaacaactcgttcctctgtctctcgattgaccccatctcgttccatagtgaag
gaaacaaaatatgaagaaccggaggagaagacgtatccatgtgacaaatgcagcgcgaaa
tacaaaagcctcgcgggtttaagctatcatcagtcgtatcttcatgatcaaaagtctagt
caaccactggttaagttattgtctcccagtatagaaatatctactagctgtgatttctgc
agcggcactgcttttatgaacaaaaatacaaaattgccagaggatctcgttagttgtcat
gattgtggtcgttctggtcatccttcctgtcttaattttaatcaaaatgtgaccaaaatc
ataaaaagaagcggatggcagtgtcttgagtgcaagagttgcaccatttgtggtacaagt
gaaaatgatgataaattgctcttctgtgacgactgtgatcgtggataccatctttattgt
ctgactccggcgctcgaaaaagctccagatgatgagtattcatgtcggttatgtcaagtt
gaattcggagacaaagcgagtgcaccggccaagaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (45)   

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