KEGG   Caenorhabditis elegans (nematode): CELE_Y48B6A.11
Entry
CELE_Y48B6A.11    CDS       T00019                                 
Symbol
jmjd-2
Name
(RefSeq) Lysine-specific demethylase 4
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_Y48B6A.11 (jmjd-2)
Enzymes [BR:cel01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     CELE_Y48B6A.11 (jmjd-2)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     CELE_Y48B6A.11 (jmjd-2)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    CELE_Y48B6A.11 (jmjd-2)
SSDB
Motif
Pfam: JmjC JmjN zf-HC5HC2H_2 Tudor_2 PHD_4 zf-HC5HC2H AF-4
Other DBs
NCBI-GeneID: 175080
NCBI-ProteinID: NP_496969
WormBase: WBGene00012982
Ensembl: WBGene00012982
UniProt: Q9U297
Position
II:complement(14234979..14243603)
AA seq 922 aa
MASAATTTHFPSSRIPSEPCASSGPLFPDDVLFTTEASSASSSSCHVENDSRPLSPTMFT
DGRTPVNISAKHLKDHPLHEPTGTSEVLTFYPTMREFKNFSQYIKKIEQNGGHLKAGIAK
IVAPEGWTPRPTRKDFSDVDDYEITQPARETIEATEKPGAYFKRNVTCRRKMPVREFRTL
ANSAQYRNPRPDLKGSEIEKHYFDNILHGEPIYGADTEGSFYDAQVEEWNMNRLGTILED
TNYEIKGVNTVYLYFGMYKTTFPWHAEDMDLYSINFLHFGAPKYWFAISSEHADRFERFM
SQQFSYQNEYAPQCKAFLRHKTYLVTPELLRQAGIPYATMVQRPNEFIITFPRGYHMGFN
LGYNLAESTNFASQRWIDYGKDAVLCDCNKDSVKIDMTHFMAKYRPDEYTTWWTYWYGGG
RELWIPKKKKEVPKKRRQSLADASKIAKRARLGASSTATDSDGSSGSSGSEEATEGSSFM
RALPAGYTVHNWQLRPDYDELLRKYKKETKLLRSDTRIDFYQEREFNHARRAEWPHCAVC
QYFQPPHMNAINHTVPNSSRRLIPKWCFSKTDTKKHEDHHEPPPPLDRLLTCSNCHVTVH
SHCCSGGGGGGGDDDDVTSSGEPWRCPRCRNRTDVEIRTTSCQLCELRGGALIPCQIGTD
STWAHVACALFNRRAIFDCPNRPGACFVEPSPRQQSETPRMPPRRLSEEYRAELGDLYEN
SRWECVVCHRTDEGLAPCVLCIEEQATTSLPTLAHVTCARRVGFVCEVRDYPRGVVMICH
KHEHSYLVNKTTQQQAYTNVKVGDFVFVEDVVEPPQKLFTRGAIVRADKKETVVVDFLDN
SCSRDNHVEDIISCECLFCENGDHQYGARVKVVWDDKQVYDAYFRGKGQMIEYTVRLEDG
REVRHPRNRLKTKRELNAYLKK
NT seq 2769 nt   +upstreamnt  +downstreamnt
atggcatcagcggctactacaacacacttcccatcatcccggataccaagcgagccgtgc
gcatcatctggccccttatttccagatgatgtgctcttcaccaccgaagcttcttcggct
tcttccagctcatgccacgtggagaacgacagtaggcccttgtcgcctaccatgttcact
gatggacggacgccagttaatatttcggcaaaacatctaaaagatcatccactccacgag
ccaaccggcacttcagaagtgctaacattctacccaacaatgcgggaattcaagaatttt
agccaatatatcaagaaaatcgagcaaaacggaggtcatctgaaagccggaatcgcaaaa
attgtggcgcccgaaggttggacgccacggccgacaaggaaggatttttcagatgttgat
gactatgaaattacacagccggcccgcgaaacaatcgaagccaccgaaaagcccggagcc
tacttcaaacgaaacgtcacgtgtcgacgaaaaatgccagtccgcgagttccgcacgcta
gccaactctgcccaataccgtaacccgcggcccgatctaaaaggctcggaaatcgaaaag
cactactttgacaacattctccacggagaaccgatctacggagccgacaccgagggaagc
ttctacgatgctcaagtggaagagtggaatatgaatcggctgggcacaattttagaggac
acgaattacgagattaagggtgttaatacagtatatctatattttggaatgtataaaacc
acttttccctggcacgccgaggacatggatttatattccattaatttccttcattttgga
gccccgaaatattggtttgcaatcagctcggagcatgctgatcgattcgagcggtttatg
agccaacagttttcatatcagaatgagtatgcaccacaatgtaaggcattcctaaggcat
aagacctacctggtgacgcctgagctgttgaggcaggccgggataccgtatgcaacgatg
gttcagaggccgaatgagtttattattacatttcctcgtggctatcatatgggctttaat
ctcggctataacctcgcagaatccaccaacttcgcctctcagagatggattgactatgga
aaggatgcggtgttgtgtgattgtaacaaggattcggtgaaaatcgatatgacccatttt
atggcaaaatatcggccggatgagtacacgacttggtggacatactggtacggtggcggt
cgggagctctggattccgaagaagaagaaggaggtgccgaagaagcggcggcagagcctt
gccgatgcatcgaagatcgcaaaaagagcacgactcggagcatcatcgacggcgacggat
tctgatggatcgtcgggatcatcgggatccgaggaagcgacggaaggatcgagcttcatg
agggctctgcctgctggatatactgtacacaattggcagctgagaccggattatgatgag
cttttgcggaagtataagaaggagacgaaacttcttcgctcggacacacgaatcgatttc
taccaggaacgagaattcaatcatgctcggcgagccgaatggccgcattgcgccgtctgc
cagtactttcagccgcctcacatgaacgctatcaatcatacggtgcctaactcatctcgc
cggctcatcccaaaatggtgcttctcgaaaaccgacaccaaaaagcacgaggatcaccac
gagccgccaccaccgctggaccgtctgctcacttgctccaactgccacgtcaccgtccat
tctcattgctgctctggcggcggcggcggcggcggcgacgacgatgacgtcacaagctcc
ggagagccctggcgctgcccacgatgccgaaaccgaaccgacgtcgagatccgaacaacg
tcctgccagctctgcgaactccgcggcggagcactaatcccgtgccaaatcggcacagac
tcgacgtgggctcacgtggcgtgtgctcttttcaatcgaagagccatttttgattgccca
aaccggcctggagcatgcttcgtcgagccatcgccccgacagcaatcggagaccccacgg
atgcccccccggcggctcagcgaagagtatcgcgcggagctcggcgatctctacgagaat
tcccgttgggaatgtgtcgtctgccatcgaacagacgagggtctggctccgtgtgtgctc
tgtattgaggagcaggcgaccacatcgcttccaacactggctcatgtcacgtgtgctcgc
cgtgttggatttgtgtgtgaagttcgtgactatccacgtggcgttgtgatgatctgtcat
aagcacgagcactcgtatctcgtgaataagacgacgcagcagcaggcctatactaacgtg
aaagtcggcgattttgtatttgtggaggacgtggtggagccgccgcagaaattgttcacg
agaggagccatcgtacgagctgataagaaggagaccgttgtcgttgacttccttgataat
agctgtagtcgtgataatcacgtggaggatatcatctcgtgtgaatgcctgttctgtgag
aacggagatcatcagtatggggcgagagtaaaagtagtgtgggacgacaagcaagtctac
gacgcgtacttccgtggaaaaggacagatgatcgagtacacggtccgactggaagatggc
cgagaagtccgccatccacggaacaggctgaaaacgaagcgagaactgaacgcgtatctc
aaaaaatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (54)   

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