KEGG   Caenorhabditis elegans (nematode): CELE_Y57A10A.15
Entry
CELE_Y57A10A.15   CDS       T00019                                 
Symbol
polg-1
Name
(RefSeq) DNA-directed DNA polymerase
  KO
K02332  DNA polymerase gamma 1 [EC:2.7.7.7]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CELE_Y57A10A.15 (polg-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cel03032]
    CELE_Y57A10A.15 (polg-1)
   03029 Mitochondrial biogenesis [BR:cel03029]
    CELE_Y57A10A.15 (polg-1)
Enzymes [BR:cel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CELE_Y57A10A.15 (polg-1)
DNA replication proteins [BR:cel03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase gamma complex (mitochondrial)
    CELE_Y57A10A.15 (polg-1)
Mitochondrial biogenesis [BR:cel03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA polymerase
    CELE_Y57A10A.15 (polg-1)
SSDB
Motif
Pfam: DNApol_Exo DNA_pol_A
Other DBs
NCBI-GeneID: 174860
NCBI-ProteinID: NP_496592
WormBase: WBGene00013258
Ensembl: WBGene00013258
UniProt: Q9U208
Position
II:complement(12189789..12199962)
AA seq 1072 aa
MRPPKIMQIFHVSRRQIATSKTSNFERKTIETVCPRVHNYLFPHVSAPSTSSAAEYTGVL
PPLVADNVVDHFGVLAEQQTRKYKELLEKACEFDLETAKNVLEHIDKTDGWHYKTGWTRY
PFSTSEPPETIDFPRDSILFFDIELVVRDGTLPTLAIALGRDAWYGWCSDRLIYESEIPE
IPTKADLIPIGEIGMEKVIIGHNVGFDRARCREAYQSINGSKIRFMDTMSMSIPMYGMAD
HQQSLYEMYDVETNDSHSDWMNAWKGRVSKNSLVAVHDHLYPDKAINAEGFSKKTMRASF
VKDPIEQIREDFQPLMSYCARDNILCAEIYFRLWPEFIKRFPHPATLSGMLNMGNVYLPI
NSYWKMFYEKNVQTCEQKKTAATRKIIESARLVAKRLDDEGEEIGPEKNDVWMWHHDWTF
NQKQSNFEWFNKLFKARSFVNLSLDEVDSHHIALKSHLIPAIFGFVFGPFPLFKTRSKGW
GFLVPNWKPVEKALQDPNFHEIDAKIDFKPDSAVKKFPLRSFYETVQNNVYMLGELPISP
DRKGFELDEAGLVRFYQLDHPSGEGNVGDPLTKHFAKDLKELVLRPTRYEEYFDVVLDSI
QTTQFWTSYSDRYCSEVAIWSPEATWRTAENLEMIDGAIAAAVVPAGTISRRSVHKLWVT
LTNQSTGHVIGTGIKAMVQAPAGYRLVGADVDSQEQWLAALYGDASAEKRLPLEKRVAGK
TAFSNMMLAGSKSDNTDLHSVVASQLKISRNHAKVLNYARLYGSGETHAGKHLMRVGGLK
QSEAESTASQLFKLTKGDVAKYMKVDVRMNCVVDKYIEEMVENSDVCKILTIDGIYYMPA
YTSQFASETVRFEDWLLSHYSSLLNGSSEPDSLIYSIYENPDEPRRLFVGGYESSTFNFL
ETSAAAHDLRTPILGCQIADSLGKLPEGTPDSAYFDRKYKRSVMNWIVQSSAVDFLHLLL
VSMQWLCDTYKIDARFVISIHDEVRYMCKEPDAPRLALALQLSNLLVRAYISQRVGICQL
PNTVAFFSQVDCDTVLRKEVDTESINPDGSKIADGVAWTVDDLLKLTGGKLD
NT seq 3219 nt   +upstreamnt  +downstreamnt
atgcgtcctccgaaaataatgcaaattttccacgtatcccgccgacaaattgccacgtca
aaaacctcgaatttcgagcgaaaaaccatcgaaacagtgtgcccccgtgtccacaattac
cttttcccgcatgtatcggccccgtcgacgtcatcggcggccgaatacacaggagttctt
ccaccgcttgtcgccgacaacgtcgtcgatcatttcggtgtgctcgccgagcaacaaaca
cgaaaatacaaggaattgctggaaaaagcgtgcgaattcgatttggaaaccgccaagaac
gttttggagcacattgataaaaccgacggatggcactacaaaaccggctggacacgatac
ccgttctccacttcggaacccccggaaactatcgattttccacgtgactcaattctattc
ttcgatattgaattagttgttcgtgacgggacccttccaacattggcaattgcattggga
agagatgcatggtatggatggtgtagtgatcgattaatttatgaatcagaaattccggaa
attccaacgaaagcagatttaattccgatcggagagattggaatggaaaaagtgattatt
ggacataatgttggatttgatcgagccagatgtcgggaggcttatcaatcgataaatggg
tcaaagattcgatttatggatacaatgtctatgtcgattccaatgtatggaatggctgat
catcagcaatcactttatgaaatgtatgatgttgagactaatgattcacattccgattgg
atgaacgcatggaagggtcgagtttcgaaaaattcgttggttgcagtacacgatcatctc
tatccagataaagctatcaacgcggagggtttctcgaagaaaacgatgcgagcaagcttc
gtcaaagacccaattgagcaaattcgagaagatttccagccccttatgtcctactgtgcc
cgtgataatattctatgcgcggaaatttatttccgcctatggccagaatttatcaaacga
tttccccatccggcgacactttccggaatgttgaatatgggaaatgtgtatctaccgatt
aatagttactggaaaatgttctacgagaaaaatgtgcaaacttgtgagcaaaagaagacg
gctgcgacgagaaaaatcattgaatcggcgcgattggtggcgaagagattggatgatgag
ggagaggagattgggcctgaaaaaaacgatgtttggatgtggcatcacgattggacattc
aaccaaaaacaatcaaatttcgaatggttcaacaagctgttcaaggcgcggagcttcgtt
aacttgagccttgacgaggtggacagccaccatatcgccctaaaaagtcacctgattccg
gcgattttcggcttcgtattcggaccatttcccctattcaaaactcgatcaaaaggttgg
ggatttttggttccgaattggaaaccggtcgaaaaagcgctccaagacccgaatttccac
gaaatcgacgcaaaaatcgattttaaaccggattcagcggtgaaaaagtttccgctgcga
agcttctacgagaccgttcaaaataatgtctatatgctcggcgagctgccgatttcgccg
gatcgaaagggttttgagctcgacgaggccgggcttgtgagattttatcagttggatcac
ccgtccggggagggaaatgtcggcgatccgcttaccaagcattttgcgaaggatttgaag
gagttggtgttacggccgacgagatacgaagaatatttcgacgtggtgctcgactcaatc
caaacgacccaattctggacgagctacagtgaccgatactgctcggaagtcgcgatttgg
agtccggaagctacgtggcgtaccgccgaaaacctggaaatgatagacggagcaatcgcg
gcggccgtcgttccagcgggcacaatttcccgtcgaagtgttcataaattatgggtgaca
ctgacaaatcaatctacaggacacgtcatcggtaccggaatcaaggcgatggtgcaagcg
cccgctggttatcgattagttggcgctgacgtggattcacaggagcaatggctcgctgcg
ttgtatggagatgcgagtgctgagaaaagattgccgctggaaaaacgtgtcgccggtaag
acggccttctcgaacatgatgctcgccggttcaaaatccgacaacactgatctccattca
gtagtggctagccaactgaaaattagtagaaatcacgcgaaagtgctcaattacgcaagg
ctctatggctccggggagactcatgccgggaaacatttaatgagagttggtggactgaaa
cagtctgaagccgagagcacagcttctcagttattcaaattgacaaaaggtgatgtggca
aaatatatgaaggtggatgtgagaatgaattgtgtggtggataagtatattgaggaaatg
gtcgagaattcggatgtatgcaagattttgacgattgatgggatttattatatgccggcg
tatactagtcaatttgcctcagaaactgtgcgtttcgaagattggcttctctcccactac
tcgtcacttctcaatggatcctctgaaccggatagcctaatctactcgatctatgagaat
cctgatgagccacgacgccttttcgtcggcggatatgaatcttcaacattcaatttcctg
gagacctcagcagcggctcacgatttgagaactcctattctgggatgccaaattgcggat
tcacttggaaaattgcctgaaggaacgccggattcagcgtattttgatcgaaaatataag
agatccgttatgaattggattgtacaatcgtcggcagttgatttcctccatctcctgctc
gtctcaatgcaatggctctgtgacacttacaaaatcgatgcccgtttcgtcatttcgatt
cacgacgaggtccgatacatgtgcaaagagccggatgctccgagacttgctcttgctctg
cagctttcgaatttgcttgtgagagcctatatttcacagagagtcggaatatgtcagctg
cctaataccgttgccttcttctctcaagtagattgtgatacagtactccgtaaagaagtc
gacacggagagcatcaatccggacggctccaaaattgccgacggcgtcgcctggaccgtt
gacgatctactgaagctcactggtggaaaactggattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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