KEGG   Caenorhabditis elegans (nematode): CELE_W03A3.2
Entry
CELE_W03A3.2      CDS       T00019                                 
Symbol
polq-1
Name
(RefSeq) DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cel03400]
    CELE_W03A3.2 (polq-1)
Enzymes [BR:cel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CELE_W03A3.2 (polq-1)
DNA repair and recombination proteins [BR:cel03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    CELE_W03A3.2 (polq-1)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical DEAD ResIII Helicase_C HTH_61
Other DBs
NCBI-GeneID: 175810
NCBI-ProteinID: NP_001367994
WormBase: WBGene00020964
Ensembl: WBGene00020964
Position
III:complement(5791119..5803160)
AA seq 1603 aa
MDEASCRFPEWVSSKIIDYYAEQNIKALFDWQIDVLNEARQFEDQHLIFSAPTSAGKSIV
AELLSWKVASTGRKVLFVLPYISVAREKLHQIQRCWRRDDISVCGFIGPQASNPNEWLGA
VCTIEKAASLTNRALSEDWFEEIGMIVVDEMHMVFDSSRGAHIEHMLSKVLLWNQSALEK
VRIIGMSATIPELYRIGKWLDGAKVFEARFRPIVLQNHIVIGSELRKSGDNKVLREFSED
PLILLTEESFRRNSQTLVMISSKLDAEKTALNIASRFHEINKTDSSLLEILKERANGLLF
IKHGLERNGCKDRNVMSTLAWGVAYHHAGLTMEERECIELGFREKNIVILVATSTLASGV
NLPAERVLIKAQPRGPSALTSLNYRQMVGRAGRTGHATRGETYLLIKKCDRDAVLKIIET
PIDQGVLTRKRDAERTNLSRFILEGICTGLTTTRSQIHDLCKLLLFNSENLQLSDIAIEM
LLRNSFISQDENDDQLSPTQLGRAAIASSLPPEASLAIFEDLNSASRAIALDTELHMLYL
VTPINVSVWQECDWHHLFSIFSKLPSDHKRIAKLVGVSEKFILDQLQGRRNDKLLQIHIR
FFSALALFDLISEMSIYEVSHKYRIPRGCLQTLQSQSATYAAMIVAFCLRLGWTYLKALL
DGFATRLLFGVRSELSELVAIEGIDGQRARILHERGVTCLSHLSACDSSKLAHFLTLAVP
YSSSNSNDGLGEWLFGEPRMRVDVAARTLKERARKVLIRRVQELGISVELPKFEENEENI
QESCDSGLPDSCEGMEDELEEKENIVKMEEMTKSVTEMSLTDNTISFKSEDDLFKKEIKV
EEDEVFIKKEIDEDEEEIVEETVIECLETSLLKLKASTDEVFLRRLSQTFSPIGRSRSIL
NNSLLEDSFDRPVPRSSIPILNFITPKRESPTPYFEDSFDRPIPGSLPISSSRRKSVLTN
IANLDSSRRESINSNASDNNSFDVFVTPPTKSAKEEKRRIAVKHPRVGNIIYSPLTSSPV
IKHPKLEINHFYLKDVCHDHNAWNLWTKSSTSTSSCSIRVSDDYTGIAIRTDAGNTFIPL
LETFGGEPSPASKYFESFSKCIIPLNTRLEFLKTLAVTVEMYISSMEDAFLIFEKFGIKI
FRLKVVRIAAYLNNVIDVEQEENSNFLPILMDRYSILDPEIRKTCSSSLHKAAVEVYSLK
PIFEKMCCSGASLQLEMESCQTVLNIFYSGIVFDQALCNSFIYKIRKQIENLEENIWRLA
YGKFNIHSSNEVANVLFYRLGLIYPETSGCKPKLRHLPTNKLILEQMNTQHPIVGKILEY
RQIQHTLTQCLMPLAKFIGRIHCWFEMCTSTGRILTSVPNLQNVPKRISSDGMSARQLFI
ANSENLLIGADYKQLELRVLAHLSNDSNLVNLITSDRDLFEELSIQWNFPRDAVKQLCYG
LIYGMGAKSLSELTRMSIEDAEKMLKAFFAMFPGVRSYINETKEKVCKEEPISTIIGRRT
IIKASGIGEERARIERVAVNYTIQGSASEIFKTAIVDIESKIKEFGAQIVLTIHDEVLVE
CPEIHVAAASESIENCMQNALSHLLRVPMRVSMKTGRSWADLK
NT seq 4812 nt   +upstreamnt  +downstreamnt
atggacgaggcttcctgtagatttccagaatgggtttcttcaaaaatcatcgattattac
gcagagcagaacatcaaagcgctgttcgattggcagattgatgtgttgaatgaggcaaga
caatttgaagatcaacacttgatattcagtgcgccaacaagtgctgggaaaagcattgta
gctgaacttttatcatggaaagtcgcttcaactggtagaaaggtactcttcgtacttcct
tatatctccgtggctcgagagaaacttcatcaaattcaacggtgttggagacgagatgac
atttctgtctgtggcttcattggtccacaggcctcaaatccaaatgagtggcttggggca
gtttgtaccatcgaaaaagcagcaagtttgacaaatcgagcattatcagaagattggttt
gaggaaattggaatgatagtcgttgatgaaatgcacatggttttcgattcgtctcgtggt
gcacacattgagcacatgctctcgaaagttttgctctggaaccaatctgcactggaaaaa
gttagaattatcggaatgagtgcaactattccagaactttatcgaataggcaaatggctg
gacggtgcgaaagttttcgaagcaagatttcgaccaattgttctacaaaatcatattgta
attggttcggagttgaggaaatctggagataacaaagttctaagagaattctctgaagat
ccattaatattgcttaccgaagagagttttcgccgcaattctcagactttggtaatgatt
tcttcgaaacttgatgccgagaagactgctttgaatattgcgtcgagattccatgagatc
aataaaaccgacagctcattgttggaaatattaaaagaacgagccaatggactattattt
ataaagcatggattggaacggaatggttgcaaggatcggaatgttatgtcaacacttgca
tggggagtagcatatcatcatgctggattgacgatggaggaaagagaatgcattgaacta
ggatttcgggagaaaaatattgttattcttgtggctacaagtactttggcttcaggcgta
aatctccctgcggaacgagtactcatcaaggctcagccacgtggcccatcggctctcact
tctctaaattaccgtcagatggtgggaagagcgggaagaacaggacatgctacacgaggt
gaaacctatcttctcatcaagaaatgtgatcgagatgccgtgctgaaaatcatcgagact
ccgattgatcaaggtgttctaacaaggaaacgagatgctgaacggactaatttaagcaga
tttatattagagggaatctgcactgggctcacgacaacaagatctcagattcatgatctc
tgcaagcttctcctatttaattctgaaaaccttcaactttctgacattgccatcgagatg
cttcttcggaattctttcatctcccaagacgaaaacgatgatcaattaagtcccacacaa
ctcggaagagctgcaattgcttcatctctaccacctgaagcatcacttgccatttttgaa
gatttgaattcggcgagtcgagcaattgcactggatactgagcttcatatgctctatttg
gtaaccccaatcaacgtaagtgtttggcaggaatgtgattggcatcaccttttctcaatt
ttctcgaaacttccatcagatcataaacgaatcgcaaagttggttggagtcagtgaaaaa
tttattttggatcaacttcaaggacgaagaaatgacaaattgcttcaaattcatattcga
ttcttttctgcgttggcactttttgatttgatcagcgaaatgagcatttatgaggtatct
cacaagtaccgaattcctcgtggatgtcttcaaacactccaatcacagagcgccacttac
gcggcaatgattgtggctttttgccttcgactgggatggacatatctcaaggcactgctt
gatggatttgcaacgagattgttgttcggtgttagatcagagctctcggagcttgtggcg
attgaaggaattgatggacagagagcccgaatcctacatgaacgtggcgtgacgtgtctg
tcacatttgtccgcttgcgattcttcgaaacttgcacactttctaacattggctgttcca
tactcaagctcgaattcaaacgatggactcggcgagtggctttttggagagccaagaatg
agagttgatgtggcggctagaacattgaaagaacgggctcgaaaagtattgatcagaaga
gtgcaggagctgggaatttctgtggagttgccgaaatttgaggagaacgaggaaaatatt
caagagagttgtgatagtggacttccggatagttgtgaaggaatggaagatgagttggag
gagaaagagaatattgtgaagatggaagaaatgacaaagagtgtcacggaaatgtcactt
acagataatacaatatcatttaaaagtgaggatgatttgttcaaaaaagagattaaagta
gaagaagatgaagtttttataaaaaaagaaatagacgaagatgaagaagaaatagttgaa
gaaactgtaatcgagtgtctagaaacatctcttctgaaactaaaagcatcaacagatgaa
gtattcctaagaaggctttcacaaacattctcacctattggaagaagtcgcagtattctc
aataactcattacttgaagattcatttgatagaccagtacccagaagctctattccaatt
cttaatttcatcactccaaaaagggaatcgccaactccatatttcgaagactcattcgat
cgtccaatacctggatccttaccaataagttcttcaagacgaaagtcagttcttacaaat
attgctaatctggattcaagtcgtcgtgaatcgattaattccaatgcttcggataacaat
tcattcgatgtttttgtaactccaccaacaaaatctgcaaaagaagaaaaacgaagaatt
gctgtaaaacatccacgagttggaaatattatatattcaccactcacttccagtccagtc
ataaagcatccaaaacttgaaatcaatcatttttatttaaaagatgtttgccatgatcat
aatgcttggaatttatggacaaaatcaagtacatctacttcgagttgttcaattcgagtt
tcagatgattatactggaattgcaattagaaccgatgcggggaatacttttattccatta
cttgaaacgtttggaggagagccatcacctgcatccaagtacttcgagtcattctccaaa
tgcatcatccctctgaacactcgcttggaattcctgaaaacacttgcggttactgtagaa
atgtatatttcgtctatggaagatgctttcctgatttttgaaaagtttggaatcaagatt
ttccgactgaaagttgttcgaattgctgcgtatctgaataatgttatcgacgtggagcag
gaggaaaactcgaattttctgccaattctaatggatcgttattcaattttagatccggaa
attagaaaaacttgctcttcgagcctgcacaaagctgccgttgaagtatattccctgaag
ccgatcttcgagaaaatgtgctgttctggagcaagtttacaattagaaatggaatcttgt
cagactgtcttgaacattttctactctggcatcgtatttgatcaagctttatgcaattct
ttcatctataaaattagaaaacaaatcgagaatttggaagaaaatatttggagacttgct
tacggaaaattcaatattcattcttcaaatgaagttgcaaatgttctattctaccgcctt
ggcctaatttatccagaaacttccggatgtaaaccaaaactacgacatcttccaacaaat
aagcttatattggaacaaatgaatactcaacatccgattgttggaaaaattcttgaatat
cgacaaattcaacatacattgacacaatgcttgatgccacttgccaagttcattggaaga
attcactgttggtttgaaatgtgtacatcgactggaaggattttgacaagtgttccgaat
ttgcaaaacgttccaaagcgaatatcgtccgatggaatgtctgcccgtcaacttttcatc
gcaaactctgaaaatttgttaatcggagccgattacaagcagctggagcttcgtgttctg
gcacatttgagcaatgattcgaatcttgtcaatttaatcacatcggatagagatttattt
gaagaactctcaattcaatggaatttcccacgagatgctgttaaacagctttgctatggt
ttgatctatggaatgggcgccaaaagtttatcggagttgacaagaatgagcatagaagat
gctgaaaagatgctaaaggcgttttttgcaatgttccctggtgtaagaagctatatcaac
gaaacaaaggaaaaagtttgcaaagaagagccaatatcaactattattggaagaagaaca
attataaaagcaagtgggattggagaagaaagagcgagaattgaacgagttgctgtgaat
tatacgattcaaggatctgctagcgagatatttaaaacggctattgtggatattgaatcg
aaaattaaagaattcggcgcacaaatcgtcctaaccatccacgatgaagttctagtcgaa
tgtccagaaatccacgtggcagcagcttccgaatctattgaaaattgcatgcaaaatgct
ctttctcatttattacgagttccaatgcgggtttcaatgaaaacgggacgatcatgggct
gatttaaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (66)   
   KEGG ORTHOLOGY (1)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (79)   

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