KEGG   Caenorhabditis elegans (nematode): CELE_Y46G5A.19
Entry
CELE_Y46G5A.19    CDS       T00019                                 
Symbol
spds-1
Name
(RefSeq) PABS domain-containing protein
  KO
K00797  spermidine synthase [EC:2.5.1.16]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel00270  Cysteine and methionine metabolism
cel00330  Arginine and proline metabolism
cel00480  Glutathione metabolism
cel01100  Metabolic pathways
Module
cel_M00034  Methionine salvage pathway
Brite
KEGG Orthology (KO) [BR:cel00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    CELE_Y46G5A.19 (spds-1)
   00330 Arginine and proline metabolism
    CELE_Y46G5A.19 (spds-1)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    CELE_Y46G5A.19 (spds-1)
Enzymes [BR:cel01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.16  spermidine synthase
     CELE_Y46G5A.19 (spds-1)
SSDB
Motif
Pfam: Spermine_synth Spermine_synt_N Methyltransf_25 Methyltransf_12 MTS Methyltransf_23 BpsA_C
Other DBs
NCBI-GeneID: 174914
NCBI-ProteinID: NP_001367196
WormBase: WBGene00012909
Ensembl: WBGene00012909
Position
II:<12806899..>12810872
AA seq 366 aa
MNKLHKGWFTEFSPDDLEKMNGASDEEPTKVLKSDGQEMGGAWPGQAFSLQVKKVLFHEK
SKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDG
GILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKN
EFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGECPWLDMKLISTVIHSAR
DLFPVAKYAVGSVPTYTSGLMGYILCAKDKVNTGESVWLHLPLIAHLVAFNRKIFPAVTY
AQSIVSTYPSGSMGYLICAKNANRDVTTPARTLTAEQIKALNLRFYNSEVHKAAFVLPQF
VKNALE
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaacaagctgcacaagggatggttcaccgagttctcgccggatgacctggaaaagatg
aacggagcctccgacgaggagccaacgaaggtgctcaaatccgacggacaagagatgggc
ggcgcgtggccgggacaggcgttctcgttgcaggtgaagaaagtgcttttccacgagaag
agcaagtatcaggatgtgctggtttttgagagcacaacctatggaaatgttctagttcta
gacggaattgttcaggcaactgaacgggatgagttctcctaccaggaaatgctggcccat
ctcccaatgtttgcccatccggacccgaaacgtgtacttatcattggtggaggagatgga
ggtattttgagagaggtcttgaagcacgagtccgtcgagaaggtcacaatgtgtgaaata
gacgaaatggtgatcgatgtcgcgaaaaagttcctgcctggcatgtcgtgcggtttctca
cacccgaaactcgacttattctgcggagatggcttcgaatttttgaaaaatcacaagaac
gagttcgacgtaattatcacggacagttccgatccagttgggccggctgaatcgcttttc
gggcaaagttattacgagttgctgagagatgcgttgaaggaggatggaattttgtcatcg
caaggcgaatgcccatggctagacatgaagctcatctctaccgtaatccattcggctcgt
gacctatttcccgtggcaaagtacgcggttggcagcgtgccaacctacacgtcaggcctg
atgggctatattttatgcgcaaaggataaggtgaacactggagaatctgtgtggcttcac
ctcccactaatcgctcatctcgtcgccttcaatcgaaaaattttcccggccgtcacctac
gcccagtcgatcgtctctacctacccgtctggaagcatgggatacctgatttgtgcaaaa
aatgctaaccgtgacgtcacgactcctgctcgaaccctcactgctgaacagatcaaagcc
ctgaacttgagattctacaactcggaagttcacaaggcggcttttgtgcttccgcaattt
gtcaaaaatgctttggagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (64)   

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