KEGG T03328: LH23

Cedecea neteri M006: LH23_05985

Entry

LH23_05985        CDS       T03328

Name

(GenBank) ATP-dependent DNA helicase Rep

K03656

ATP-dependent DNA helicase Rep [EC:5.6.2.4]

Organism

cem Cedecea neteri M006

Brite

KEGG Orthology (KO) [BR:cem00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cem03400]
    LH23_05985
Enzymes [BR:cem01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LH23_05985
DNA repair and recombination proteins [BR:cem03400]
Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LH23_05985

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 DEAD ResIII AAA_11

Other DBs

NCBI-ProteinID:

AIR60224

Position

1260557..1262578

AA seq 673 aa
MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRESGYQARQIAAVTFTNKAA
REMKERVSQTLGRKEARGLMISTFHTLGLEIIKREYAALGMKSNFSLFDDTDQTALLKEL
TEGLLENDKVLLQQLISTISNWKNGLLSPAQAAAQAKGERDRIFAHCYGLYDTHLKSCNV
LDFDDLILLPTLLLQRNAEVRERWQNRIRYLLVDEYQDTNTSQYELVKLLVGARARFTVV
GDDDQSIYSWRGANPQNLVLLSKDFPALQVIKLEQNYRSSRRILNAANILIANNPHVFEK
RLFSELEHGAELKVVTANHEEHEAERVTGELIAHHFINKTNYKDYAILYRGNHQSRVFEK
MLMQNRIPYRISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLQK
LGEWAMQRNKGLFTASFDMGLSQTLSGRGLDALQRFTHWLRDVAALAEREPVAAVRDLIH
GIDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGNDLNEPMTLIQVVTRFTLRDMM
ERGESEEEADQVQLMTLHASKGLEFPYVYLVGMEEGILPHQSSIDEDNVDEERRLAYVGI
TRAQKELTFTLCRERRQYGELVRPEPSRFLLELPQDDLSWETERKVVSAEERMQKGQSNV
ANIREMLAKARKS

NT seq 2022 nt +upstreamnt +downstreamnt
atgcgtttaaaccctggccaacaacaagccgtcgaatttgtcaccggaccctgcctggtt
ttggccggagctggctcgggtaaaacgcgcgttatcaccaataagattgcgcatctgatt
cgcgaaagtggctatcaggcgcgccagatcgcagcggtaacctttaccaataaggccgcc
cgcgaaatgaaagagcgcgtttcgcagacgctggggcgcaaagaggctcgcgggttgatg
atctcgactttccacacgctggggctggagattatcaagcgtgaatatgctgcgttgggg
atgaaatctaatttctcgttgtttgacgataccgatcagaccgcactgctaaaagagcta
actgaaggcctgttagaaaacgataaggtgctgctccaacagctgatctcgacgatttcc
aactggaagaacggcttgttgtctccggcacaggccgccgcgcaggcgaagggcgaacgg
gatcgtatttttgcccattgctacggcctttacgacacgcacctgaagtcctgcaacgtg
ctggattttgacgatctgattttgctgccaacgctgctgctgcagcgtaatgcagaagtt
agggagcgctggcaaaaccgtattcgctatctgctggtggacgaataccaggataccaac
accagccagtatgagctggtgaaactgctggttggcgcgcgggctcgctttaccgttgta
ggtgacgatgaccaatccatttattcgtggcgtggcgcgaatccgcagaacctggttctg
ctgagcaaagattttccggcgctgcaggtgatcaagcttgagcagaactaccgctcgtcc
cgccggattttgaatgcggccaatattctgatcgctaacaatccgcacgtttttgagaag
cggcttttctctgaacttgaacacggcgcagaattgaaggtcgtgacggcgaatcatgaa
gagcatgaggccgaacgcgttaccggcgaactgatcgcccaccactttattaataaaact
aactataaagattacgcgattctgtaccgcggcaatcaccagtcgcgggtgttcgaaaag
atgctgatgcaaaaccgcatcccgtatcgcatctccggcggcacttcatttttctcgcgt
ccggagattaaagatctgcttgcctacctgcgggtgctgacgaacccggatgatgacagt
gcatttctacgtattgtgaacacacccaaacgtgaaattggcccggcaacgctgcaaaag
cttggcgagtgggcgatgcagcgcaataaaggcctgttcaccgccagctttgatatggga
ctaagtcagacgctcagcgggcgcggtcttgatgcgttgcagcgttttacccactggctg
cgggacgtggctgcgcttgccgagcgcgaaccggtggctgccgtgcgagatcttatccac
ggcatcgactatgaaagctggctgtatgaaacctcacccagcccgaaagccgccgaaatg
cggatgaaaaacgttaaccagcttttcagctggatgaccgagatgcttgaaggcaacgac
ctgaatgagccgatgacgttaatccaggtagtaacgcgttttaccctgcgcgacatgatg
gagcgtggtgaaagcgaagaagaggccgatcaggttcagttgatgaccctgcatgcttct
aagggcctggaattcccctatgtctatcttgtcggcatggaagaagggatcctgccgcat
caaagcagcatcgacgaagataacgtggatgaagagcgccgcctggcttacgtgggaatt
actcgggcgcaaaaagagctgacgtttacgctgtgccgggaacgccggcagtatggtgag
ctggtgcgccctgaaccaagccggtttctgctggagctgccacaggacgatttaagctgg
gaaactgagcgtaaagtggtttctgccgaagagcggatgcaaaaaggacaaagtaatgtg
gccaacatccgtgagatgctggccaaagcgcgtaaaagctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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