KEGG   Cedecea neteri M006: LH23_09155
Entry
LH23_09155        CDS       T03328                                 
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
cem  Cedecea neteri M006
Pathway
cem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LH23_09155 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cem03019]
    LH23_09155 (pcnB)
Enzymes [BR:cem01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     LH23_09155 (pcnB)
Messenger RNA biogenesis [BR:cem03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LH23_09155 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: AIR60822
Position
complement(1929559..1930905)
AA seq 448 aa
MVEETETLPHITVIPRDQHAISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKP
KDFDVTTSATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEEQQSADRQTS
QRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFSVRDYVGGLNDLNKGIIRLIGD
PETRYREDPVRMLRAVRFAAKLDMTISPETGEPIPRLATLLNDVPPARLFEESLKLLQAG
YGFETYQLLREYQLFQPLFPIITRYFTEQGDSPMERIIALVLKNTDTRIHNDMRVNPAFL
FAAMFWYPQLEMAQKIAQESGLAYYDAFALAMNEVLDEACRALAIPKRITTLVRDIWGLQ
LRLSRRQGKRAWKLMEHPKFRASYDLLALRAEVENNQELLRLTKWWGEFQVAAPPMQKDM
LNDLGDEPAARRRTRRPRKRAPRREGNS
NT seq 1347 nt   +upstreamnt  +downstreamnt
gtggtcgaggagaccgaaactctcccgcacattactgttatcccgcgtgaccagcacgct
atttcccgcaaagatatcagtgaaaatgccctcaaggtgctctaccgtttaaacaaagca
ggctacgaggcctacctcgtcggcggcggcgtccgcgacctactgctgggcaaaaaaccg
aaagatttcgacgtcaccaccagcgcgacgccggaacaagttcgcaaactgttccgtaac
tgccgcctggttggccgccgtttccgcctggctcacgtcatgttcgggcctgaaatcatc
gaagtggccaccttccgcggccatcatgaagagcagcagtctgccgaccgtcagacctcg
cagcgtggccagaacggcatgctgctgcgtgataacatctttggttctatcgaagaagat
gcccagcgtcgtgacttcactatcaacagtctttattacagcgtggccgatttctccgtg
cgggattacgtcggcggcctgaacgatctgaacaaaggcattattcgcctgattggcgac
ccggaaacgcgctaccgcgaagatccggtgcgaatgctgcgcgccgtgcgctttgccgcc
aagctggatatgaccatcagcccggaaactggcgaaccgattcctcgcctcgccacgctg
cttaacgatgtgcccccggcacgtctattcgaagagtcgctcaagcttctgcaggcaggg
tacggatttgaaacctaccagctgctgcgtgaatatcagctcttccagccgctgttccct
atcatcacccgctacttcaccgagcagggcgacagcccaatggagcgcattattgcgctg
gtgctgaagaacaccgatacccgcattcacaacgatatgcgcgtgaacccggcgttcctg
tttgcggcaatgttctggtatccacagttggaaatggcgcaaaaaatcgcccaggaaagt
ggcctcgcttactacgacgcctttgcattggcgatgaatgaagtgctggatgaagcctgc
cgcgcgctggcgattccgaaacgcattactacgctggtgcgcgacatttggggcctgcag
cttcgcctctcgcgccgccagggtaaacgcgcctggaagctgatggagcatcctaagttc
cgggcgtcttacgacctgctggcgctccgcgcggaagtcgaaaacaaccaggaactgctg
cgtctgaccaaatggtggggcgagttccaggtagctgcgccgccaatgcaaaaagatatg
ctgaacgaccttggcgatgagcctgccgcacgccgccgcacgcgtcgcccgcgcaaacgc
gcgccacgccgtgaaggtaattcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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