KEGG   Canis lupus familiaris (dog): 475767
Entry
475767            CDS       T01007                                 
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
  KO
K12847  U4/U6.U5 tri-snRNP-associated protein 2
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    475767 (USP39)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfa03041]
    475767 (USP39)
Spliceosome [BR:cfa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    475767 (USP39)
SSDB
Motif
Pfam: UCH zf-UBP UCH_1 zf-UBP_var
Other DBs
NCBI-GeneID: 475767
NCBI-ProteinID: XP_532977
Ensembl: ENSCAFG00000007667
VGNC: 48194
UniProt: A0A8C0Q6J3 A0A8I3NIC3
Position
17:complement(39109745..39141965)
AA seq 561 aa
MSGRSKRESRGSTRGKRESESRGSSGRVKREREAEAPSSRGSPVRVKREVEPVSAREAPT
PVVPAVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKLC
SISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDS
SLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALS
NVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVV
LCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPD
LPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNG
ITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYL
SEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITL
SEAYIQIWKRRDNDETNQQGA
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgtctgggcgatccaagcgtgaatctcgtggttctacccgcggcaagcgcgagtccgag
tcgcggggcagctcgggtcgcgtcaagcgggagcgggaagccgaggcgccgagctcccgg
ggcagtccagtgcgtgtgaagcgggaggtcgagccggtgagcgcgcgcgaggccccgacg
ccagtcgtcccggctgtgcgggtgaagcgggagcgcgaggtggacgaggactctgagcct
gagcgggaggtgcgagcaaagaatggccgtgtggattctgaggatcggaggagccgccat
tgcccgtacttggataccattaacaggagtgtgctggactttgactttgagaaactatgt
tccatctccctctcacatatcaatgcatatgcctgtctggtgtgtggcaagtactttcag
ggccgaggtttgaagtctcatgcctatattcacagtgtccagtttagccatcatgtcttc
ctcaacctccacactctcaagttttactgccttccagacaactatgagatcatcgattct
tccctggaggatatcacatatgtgttgaagcccactttcacaaagcagcagattgcaaac
ttggacaagcaagccaaactctcccgggcatatgatggtactacttacctgccaggtatt
gtgggcctgaataacataaaggccaacgactacgccaacgctgtccttcaggctttgtct
aatgttcctcctctacggaactacttcttggaagaagataattataagaacatcaagcgt
cctccgggggatatcatgttcttgttggtccagcgttttggagagctgatgagaaagctc
tggaaccctcgaaatttcaaggcgcatgtctctccccatgagatgcttcaggctgttgtc
ctttgcagcaagaagacttttcagatcaccaagcaaggggatggagttgacttcctgtcc
tggtttctgaatgctctgcactcagctctggggggtacaaagaagaaaaagaagactatt
gtgactgatgttttccaggggtctatgaggatcttcactaaaaagcttcctcatcctgat
ctgccagcagaagaaaaagagcagctgctgcataatgatgaataccaggagacaatggtg
gagtccaccttcatgtacctgacactcgatctccctactgctcccctctacaaggatgag
aaggagcagctcattatccctcaggtgccgctcttcaacatcctggccaagttcaacggt
atcactgagaaggaatataagacctacaaggagaactttctaaagcgcttccagctcacc
aagctccctccatatctcatcttttgtattaagagattcactaaaaacaatttctttgtg
gagaagaatccaactattgtcaacttccctattacaaatgtggatctgagagaatacttg
tctgaagaagtacaagcagtgcacaagaatactacctatgacctcattgccaacattgta
cacgacggcaagccctcggagggctcctaccggatccacgtgcttcatcacgggacgggc
aaatggtatgaattacaagacttgcaggtgactgacatccttccccagatgatcacgctc
tcggaggcttatattcagatttggaagaggcgagataatgatgaaaccaaccagcagggg
gcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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